18O-labeled water |
IAEA-NO3 and USGS-34 reference solutions analyzed for N and 0 isotope ratios |
Biological Nitrogen Isotope Fractionation |
Strain |
3 Species Coral Growth |
Percent growth of corals in experimental plots |
Coral Biodiversity |
Species |
3 Species Macroalgal Cover |
Macroalgal cover at month 3 in experimental plots |
Coral Biodiversity |
Species |
3 Species Tissue Mortality |
Percent tissue mortality of corals in experimental plots |
Coral Biodiversity |
Species |
4a_gut area-pixels |
Pseudodiaptomus marinus gut area measured in pixels |
food limitation in copepod nauplii |
species |
4b_min fluorescence thresholds |
Pseudodiaptomus marinus gut minimum fluorescence thresholds |
food limitation in copepod nauplii |
species |
4c_gut fullness index |
Copepod gut fullness index measured by pixels |
food limitation in copepod nauplii |
species |
9 Species Experiment (Months 3 and 7) |
Percent growth and tissue mortality of corals in experimental plots |
Coral Biodiversity |
Species |
AA-CSIA Bradley |
Amino acid compound specific nitrogen isotopic analysis (AA-CSIA) data from Bradley et al. 2015. |
CAMEO_Trophic_Position |
species |
AA-CSIA Olson |
Amino acid compound-specific isotope analysis (AA-CSIA) of tissue samples from four distinct trophic groups across the food web in the pelagic eastern tropical Pacific Ocean |
CAMEO_Trophic_Position |
species |
Abyssal deposit feeders AACSIA |
AA-CSIA of abyssal deposit feeders, their gut contents and the surrounding surface sediments collected on R/V Atlantis cruise AT4210 and R/V Western Flyer cruise Pulse 72 |
Abyssal food web |
Species |
Acartia tonsa mortality with CTD data: 5 daytrips |
Acartia tonsa mortality from net tows and associated CTD data |
CopesPopDynHypoZone |
Species |
Acartia tonsa mortality with CTD data: RV Sharp |
Acartia tonsa mortality from Niskin and associated CTD data |
CopesPopDynHypoZone |
Species |
Accession numbers |
Palatability of non-native alga |
Genetic Adaptation Marine Inv |
species |
Acropora hyacinthus ITS2 amplicon sequencing |
|
Moorea coral bleaching |
Host |
algae_calcification |
Calcification rates of 8 algae species at varying pCO2 concentrations |
OA_Corals, MCR LTER |
species_alga |
algal cover time series |
Percent cover and abundance of algae and invertebrates in the rocky intertidal zone, Invertebrate survey counts in the rocky intertidal zone, 2004-2013 |
Intertidal Diversity |
species |
Amino Acids |
Amino acid compound-specific isotope analysis (AA-CSIA) from tissue samples from pelagic fish. |
CAMEO_Trophic_Position |
species |
ammonium removal by seaweeds |
Macroalgal contribution to NH4+ removal in tidepools |
Regenerated Nitrogen |
species |
Anderson & Rynearson 2020: Skeletonema CHN |
CHN |
Phytoplankton Community Responses |
Species |
Anderson & Rynearson 2020: Skeletonema thermal growth |
Anderson & Rynearson 2020: Skeletonema thermal growth |
Phytoplankton Community Responses |
Species |
Antarctic Coral Flabellum impensum metabolism |
O2 consumption and metabolic enzyme activity in the Antarctic coral, Flabellum impensum |
Antarctic_micronek, CARIACO-micronek |
Species |
Aquaculture treatments |
Determining the effects of prey combination on larval Elacatinus colini standard length and survival. |
Elacatinus Dispersal II |
sp |
Arenicola marina hydraulics |
Images, porewater pressure, O2 data from lab expts of lugworm Arenicola marina in diff sediment types. |
Infaunal Hydraulics |
species |
ARISA bin taxonomy |
Putative taxonomic information for ARISA bins as generated from clone libraries, |
Marine Viral Dynamics, Bacterial, Archaeal, and Protistan Biodiversity |
SecSpecies, Species |
Artificial Reef fDOM |
Artificial Reef fDOM |
Ecological Diversification in Sponges |
Species |
ASU Fragmentation – SMURF Settlement Rate |
|
Habitat Fragmentation |
Sci_name |
ASU Fragmentation – Trap Fauna CPUE |
|
Habitat Fragmentation |
Sci_name |
AT21-02: sample log - Barbados |
Specimen log from Jason dives, cruise AT21-02, June 2012 |
SEEPC |
species |
AT26-14 Alvin sample logs |
Sample logs for R/V Atlantis (AT26-14) Alvin dives in 2014. |
Lophelia OA |
sampleLog_species |
AT26-15: sample log - GoM-FL |
Specimen log from Alvin dives, cruise AT26-15, May/June 2014 |
SEEPC |
species |
AT29-04: sample log - WAM |
Specimen log from HOV Alvin dives, cruise AT29-04, July 2015 |
SEEPC |
species |
Atlantic silverside (Menidia menidia) cDNA transcriptome and TSA accessions |
Atlantic silverside (Menidia menidia) cDNA transcriptome and TSA accessions |
Fishery Genome Changes |
species |
Atlantic silverside (Menidia menidia) raw low-coverage genomic sequence accessions |
Accession numbers for raw low-coverage genomic sequence reads from 876 different Atlantic silverside individuals |
Fishery Genome Changes |
Species |
Atlantic silverside metabolic rates |
CO2, temperature, and oxygen effects on Menidia menidia metabolic rates |
HYPOA |
species |
Auto-induction in Marine Diatoms |
Results from laboratory experiments testing autoinduction in marine diatoms, Thalassiosira pseudonana and Phaeodactylum tricornutum |
PhytoplanktonQS |
species |
Bag Seine Catch Data |
Monthly bag seine catch data of vertebrates and invertebrates from bays along the Texas coast from 1982 to 2016 |
Texas Coastal Fish |
Species_latin_name |
barnacle_mussel_survey |
Intertidal population surveys of mussels and barnacles along European coast (Spain, France) |
EUROWINTER |
species |
Basslet aggression |
Data describing basslet aggression from experiments conducted in 2014 in the Bahamas. |
BiodiversityLossEffects_lionfish |
Agg_Species, Recip_Species |
Basslet counts |
Basslet counts of two species from experiments conducted in 2014 in the Bahamas. |
BiodiversityLossEffects_lionfish |
Bass_Species |
Basslet feeding rates |
Feeding rates of two basslet species from an experiment conducted in 2014. |
BiodiversityLossEffects_lionfish |
Bass_Species |
Basslet growth |
Growth rates of two basslet species from an experiment conducted in 2014 in the Bahamas. |
BiodiversityLossEffects_lionfish |
Bass_Species |
Basslet position |
Feeding positions of two basslet species from an experiment conducted in 2014 |
BiodiversityLossEffects_lionfish |
Bass_Species |
Behavior of focal lionfish at different prey densities |
Focal lionfish behaviors at different densities of local lionfish and prey fish. |
BiodiversityLossEffects_lionfish |
strike_species, blow_species, kill_species |
Benthic foraminiferal abundances |
Benthic foraminiferal abundances from Mud Patch multicores |
OA, Hypoxia and Warming |
species |
benthic invert codes |
Benthic invertebrate taxonomy, species and codes - St. John USVI survey 1988-2007 |
St. John LTREB |
genus_species |
Benthic organism counts - 20m |
Benthic organism counts |
Hurricane impacts on deep reefs |
Species, spp_A |
Bermuda annual coral growth rates |
Annual linear extension, skeletal density, and calcification rates from Bermuda corals |
Coral Calc |
species |
BIB Experiments |
Bloom in Bottle (BIB) experiments; culture studies of the effect of Si and N stress on diatoms of the Santa Barbara Channel. |
SBDOM, SBC LTER |
species |
Biochemistry of sponges |
|
DimensionsSponge |
Species |
BioLog Eco-plates experiment - 14C-labeled uptake |
BioLog Eco-plates experiment - 14C-labeled uptake |
Cocco-Mix |
Species |
BioLog Eco-plates experiment - Metabolic potential |
BioLog Eco-plates experiment - Metabolic potential |
Cocco-Mix |
Species |
Biomass and density data |
Biomass and density of MPAs and non-MPAs in Fiji |
Killer Seaweeds |
minor |
birds |
Birds from NEP NCC, R/V New Horizon |
NEP |
species |
bird_observ |
Seabird Survey Observations |
SOGLOBEC |
species |
Bivalves - Table 1 - Bivalve species - Presence 1 and absence 0 of Bivalve species from the Northeast Atlantic |
Bivalves - Table 1 - Bivalve species - Presence 1 and absence 0 of Bivalve species from the Northeast Atlantic |
Deep Sea Benthic Dynamics |
Species |
Bivalves - Table 2 - Bivalve species - Presence 1 and absence 0 of Bivalve species from the North American Basin |
Bivalves - Table 2 - Bivalve species - Presence 1 and absence 0 of Bivalve species from the North American Basin |
Deep Sea Benthic Dynamics |
Species |
Blank sources |
Volume effects on blanks originating from the bacterial concentrates, equilibration with atmospheric N2O, and NO3- contamination of the water into which the standards were diluted |
Biological Nitrogen Isotope Fractionation |
Strain |
BLASTp homology data |
BLASTp homology data from genes obtained in samples collected on LMG1411. |
Polar_Transcriptomes |
species |
Bleached octocoral genotypes |
Bleached Octocoral Symbiont Cell Counts |
Octocoral symbiont diversity |
Species |
Bleached Octocoral Symbiont Cell Counts |
Bleached Octocoral Symbiont Cell Counts |
Octocoral symbiont diversity |
species |
Bleaching card scores |
Bleached Octocoral Symbiont Cell Counts |
Octocoral symbiont diversity |
Species |
Boron isotopes and trace elements |
Boron isotopes and trace elements experimental data of tropical corals |
CoralCalcifyFluid_pH |
species |
BOWLS sample log |
Sample log for specimens collected for genomics analyses |
BOWLS |
species |
Breviolum antillogorgium microsatellite loci |
Microsatellite loci for B. antillogorgium cultures |
Host Symbiont Temp Response |
Host, Putative_Species |
brooded coral larvae 1 - release |
Brooded coral larval release schedule relative to lunar day from P. damicornis and S. caliendrum in June & July 2010 (Cumbo, 2012) |
Climate_Coral_Larvae, MCR LTER |
species |
brooded coral larvae 1 - respiration |
Brooded coral larval respiration (Cumbo, 2012) |
Climate_Coral_Larvae, MCR LTER |
species |
brooded coral larvae 1 - settlement competency |
Brooded coral larval settlement competency (Cumbo, 2012) |
MCR LTER, Climate_Coral_Larvae |
species |
brooded coral larvae 1 - size_July |
Brooded coral larval size from July 2010 experiment (Cumbo, 2012) |
Climate_Coral_Larvae, MCR LTER |
species |
brooded coral larvae 1 - size_protein_symbionts_photosynth |
Brooded coral larval size, protein content, symbiont (Symbiodinium) densities, maximum photochemical efficiency of PSII (Cumbo, 2012) |
Climate_Coral_Larvae, MCR LTER |
species |
brooded coral larvae 3 - respiration raw data |
Respiration of brooded coral larvae at high and ambient temperature and pCO2, March 2011 (Cumbo et al, JEMBE, 2013) |
Climate_Coral_Larvae, MCR LTER |
species |
BrownOsenberg_2018- FlDyeSurvey |
Datasets that evaluate how vermetid (Ceraesignum maximum) modify physical and chemical conditions above coral-algal interactions (i.e., light, flow and oxygen). |
Vermetids_Corals |
coral_species |
Bulk Raw Isotopes |
Bulk raw isotopic data from tissue samples from pelagic fish. |
CAMEO_Trophic_Position |
species |
Bulk Raw Isotopes - Non-tunas |
Bulk raw isotopic data from tissue samples from non-tuna species collected in the eastern tropical Pacific Ocean onboard two NOAA research ships |
CAMEO_Trophic_Position |
species |
Bulk Raw Isotopes - Tunas |
Bulk raw isotopic data from tissue samples from three species of tunas collected in the eastern tropical Pacific Ocean onboard commercial tuna purse-seine vessels |
CAMEO_Trophic_Position |
species |
Calanus finmarchicus transcriptomics |
Links to a microarray and transcriptome for C. finmarchicus |
CFINTRANSCRIPT |
species |
calcification rates |
Calcification data from the coral A. pulchra and alga L. kotschyanum under 2 pCO2 levels, 5-6 temperature treatments, and two different seasons (austral summer and spring) |
OA coral adaptation |
species |
calvet_ak_ltop |
AK-LTOP CalVET Net Tow counts/biomass |
NEP |
species |
Cannon_2014_S1: Collection and locality information |
Hemichordata and Echinodermata collection and locality information |
Antarctic Inverts |
species |
Cannon_2014_S2: Hemichordata and Echinodermata sample log and accessions |
Hemichordata and Echinodermata transcriptome NCBI accessions |
Antarctic Inverts |
species |
Capture efficiency of scyphomedusae |
Raw capture efficiency data of scyphomedusae from video analysis. |
Medusan Feeding Mechanics |
Cnidaria_species |
Carbon and Nitrogen |
Carbon and Nitrogen |
High latitude kelp dynamics |
Species |
Carbon flux for Caribbean coral reef sponges |
|
Sponge_Loop |
species |
CARP accession numbers |
Sequence accession numbers for coral acid rich proteins (CARPs) from Stylophora pistillata. |
CROA |
species |
Caspase PAM data |
|
Coral Immune Traits |
SPECIES |
Caspase temperature data |
|
Coral Immune Traits |
SPECIES |
Cell biovolumes |
Biovolume data from samples obtained on LMG1411. |
Polar_Transcriptomes |
species |
cetaceans |
Cetacean observations from NEP NCC, R/V New Horizon |
NEP |
species |
Chorion thickness E1 |
Chorion thickness E1 |
HYPOA |
Species |
Ciliate PIV data: Fig 3-RSBP |
Ciliate escape response micro-PIV data used in Figure 3, RSBP |
Protist Behavior and Imposed Flow |
species |
clarke-bumpus_copes |
Copepods from Georges Bank identified by Clarke & Bumpus, 1939-1941 |
CBGB |
species |
cluster analysis - Carbonate Organic Matrix proteins |
Carbonate Organic Matrix (COM) proteins from coral, mollusk, and sea urchin. |
CROA |
species |
cluster analysis - cross-phyla protein clustering |
Cross-phyla clustering of non-redundant carbonate organic matrix proteins grouped by hierarchical clustering. |
CROA |
coral_species, mollusk_species, sea_urchin_species |
cmarz_asia_zoop |
Zooplankton collected by the CMarZ-Asia from 1977 to 2002 |
ORI_Historical |
species |
CO2 x temperature effects on Menidia menidia offspring |
CO2 x temperature specific early life survival and growth assessed by 5 factorial experiments |
HYPOA |
species |
cod bycatch redux gear_swimming behavior |
Cod by-catch reducing gear: video observations of fish behavior |
NEC-CoopRes |
species |
cod bycatch redux_catch data |
Groundfish Trawl Nets Designed to Reduce the Bycatch of Cod: catch data |
NEC-CoopRes |
species |
cod pots: catch and size |
POTYEAR: Determining the Seasonality of Cod Pots: fish catch,size |
NEC-CoopRes |
species |
COLI 16S rRNA sequences |
16S rRNA Sequences from cathode-oxidizing lithoprophic isolates (COLI) from Catalina Harbor Marine sediments. |
PassElectronsThruMarSed |
species |
Colony level bleaching severity |
|
Mcap pairs time series |
Species |
Colony monitoring |
Coral health survey, Guam 2014 |
Reef Resilience in Guam |
species |
Colony to colony interactions |
Data describing the types of interactions between colonies. |
VI Octocorals, St. John LTREB |
species |
Comeau 2013: calcification and chemistry |
|
OA_Corals, MCR LTER |
Species |
Comeau 2014 PRSB: calcification and chemistry |
|
MCR LTER, OA_Corals |
Species |
Community |
|
Costa Rica Seeps |
Species |
Community survey data on invertebrate and algal density |
Kelp forest community surveys on invertebrate and algal density. |
Kelp_Forest_Resilience |
classcode |
Composition of experimental marine invertebrate communities across latitude |
Composition of experimental marine invertebrate communities across latitude |
Competition and Predation across Latitude |
MorphName |
Connectivity Matrices |
Connectivity matrices for 2 mussel species ( Mytilus californianus and Mytilus galloprovincialis) |
Bivalve Connectivity |
species |
consumer residence times |
Residence times of consumers in Galápagos subtidal, Isla Baltra |
GMR Trophic Cascades |
species |
Copepod abundance - bongo net tows |
Copepod species abundances from bongo tows from two Arabian Sea JGOFS Process cruises |
Arabian Sea, Arabian Sea Diapausing Copepods |
species |
Copepod abundance - MOCNESS |
Copepod species abundances from MOCNESS tows from the Arabian Sea, 1994-1995 |
Arabian Sea, Arabian Sea Diapausing Copepods |
species |
Copepod egg production |
Copepod egg production at low-high pCO2 levels |
OA-Copepod_PreyQual |
species |
Copepod escape direction |
Copepod escape direction from stimuli |
PreyEscape |
species |
Copepod escape speed |
Copepod escape speed from stimuli |
PreyEscape |
species |
Copepod grazing |
Copepod grazing at low-high pCO2 levels |
OA-Copepod_PreyQual |
species |
Copepod Ingestion - Gut Pigment |
Copepod gut pigment data for each of six experiments quantifying the ingestion by copepods of marine snow and phytoplankton at different phytoplankton growth phases |
PlanktonAggDyn |
species |
Copepod Ingestion - Stable Isotope Analysis |
Copepod ingestion rate as calculated through stable isotope analysis from experiments quantifying the ingestion by copepods of marine snow and phytoplankton at different phytoplankton growth phases. |
PlanktonAggDyn |
species |
coral - carbon oxygen boron isotopes |
Coral carbon, oxygen, and boron isotopes; coral Sr/Ca, Mg/Ca, U/Ca, and Ba/Ca; coral chlorophyll-a. |
repeat coral bleaching |
species |
coral - skeletal carbon and oxygen isotopes |
Coral skeletal carbon and oxygen isotopes; measured photosynthesis to respiration ratios; isotope-based photosynthesis to respiration ratios. |
repeat coral bleaching |
species |
Coral 3D scans |
3D scans of Caribbean acroporid corals |
Coral Hybridization |
Species |
Coral Biopsy Sample Log |
Sample log of coral biopsy specimens for genetic analysis of algal symbionts |
Response of ETP to ENSO |
Species |
coral calcification and energy reserves |
Coral calcification, chlorophyll a content, algal density, energy reserves, tissue biomass. |
OA_coral_physiology |
species |
Coral calcification rates |
Coral calcification rates |
RAPID Hawaii |
Species |
Coral cDNA Expressed Sequences |
cDNA Expressed Sequence Tags for the corals Acropora palmate and Orbicella faveola |
SymBioSys |
species |
Coral colony photos from 2015 bleaching event |
|
Bleaching American Samoa |
Species |
Coral Colony Physiological Summary |
|
Coral Resilience |
Species |
Coral colony sequece accessions: Hidden resilience to recurrent bleaching |
|
Bleaching American Samoa |
species |
Coral colony sequence accessions: The genomics of recovery from coral bleaching |
|
Bleaching American Samoa |
species |
coral colony size |
annual coral colony surface area and perimeter measurements from Maui, Hawaii, 1999-2005 |
HI Coral Reefs |
species |
Coral density - Palau |
|
Coral Reef Adjustment |
species |
Coral extension rates meta-analysis |
|
Coral Reef Adjustment |
species |
Coral health status and DNA concentration |
Health status and species of each sample taken. |
Contagious coral diseases? |
species |
Coral histology |
Histological analysis of Caribbean acroporid corals before and after exposure to thermal stress. |
Coral Hybridization |
Species |
Coral iCA Activity |
Internal carbonic anhydrase activity in three species of coral from the Florida Keys |
OA_coral_Ci_acquisition |
Species |
Coral images and accession numbers |
Species images and accession numbers for tissue, mucus, and holobionts analyzed. |
Coral Microbial Relationships |
species |
coral life stages - Illumina |
Illumina sequenced 16S rRNA genes amplified from different life stages of 2 corals |
MiCoDe |
species |
coral percent cover |
Percent cover of coral and other sessile invertebrates at Caribbean reefs |
Climate_Corals_Bleach_Disease |
species |
Coral physiological and δ15N isotopic measurements. |
Coral physiological and δ15N isotopic measurements |
OA_coral_physiology |
Species |
Coral physiological measurements |
Montipora capitata and Porites compressa Physiological Measurements for Experimental Corals and Parent Colonies |
RAPID Hawaii |
Species |
Coral physiology 22-month mesocosm experiment |
Coral physiology 22-month mesocosm experiment |
Coral Adaptation |
species |
coral physiology and algal type |
Coral metabolism, energy reserves, calcification, algal density and type |
repeat coral bleaching |
species |
Coral physiology survey |
|
Coral Adaptation |
full_species_name |
Coral post-settlement physiology |
coral post-settlement physiology at high pCO2: respiration, protein content, seawater properties and carbonate chemistry |
Climate_Coral_Larvae, MCR LTER |
species |
Coral pyrosequencing data |
Microbial communities of corals analyzed using 454 Illumina pyrosequencing |
Contagious coral diseases? |
organism |
Coral Species Counts |
Coral Species Counts |
Coral microbiome resilience |
Species |
Coral species Information meta-analysis |
coral species info |
Coral Reef Adjustment |
spplist |
Coral stable isotopes |
Carbon and nitrogen stable isotopes of Hawaiian corals |
Coral Adaptation |
Species |
Coral Surface Area and Zooxanthellae Counts |
Coral Surface Area and Zooxanthellae Counts |
Sponge Holobiont DOM |
Coral_Species |
coral-microbe T-RF - development |
Specificity of associations between bacteria and the coral Pocillopora meandrina during early development |
MiCoDe |
species |
CoralLarvae_comparison_respir |
coral larvae respiration data extracted from the literature for comparative purposes |
Climate_Coral_Larvae, MCR LTER |
species |
CoralLarvae_release |
larvae release data from coral colonies collected and retained in lab. |
Climate_Coral_Larvae, MCR LTER |
species |
CoralLarvae_respir |
coral larvae respiration data |
Climate_Coral_Larvae |
species |
CoralLarvae_size |
coral larvae size and calculated mass data |
Climate_Coral_Larvae, MCR LTER |
species |
Coralline algae experiment - algal growth data |
Wet weight and buoyant weight measurements of macroalgae taken at the beginning and end of a laboratory experiment testing the effects of pH, light availability and biotic interaction on coralline algae calcification and productivity. |
High latitude kelp dynamics |
species |
Coralline algae experiment - P-E curve data |
Oxygen evolution data for macroalgae during photo physiology incubations, for generation of photosynthesis-irradiance curves. Run in the last week of a laboratory experiment testing the effects of pH, light availability and biotic interaction on coralline |
High latitude kelp dynamics |
species |
Coralline algae experiment - total alkalinity (TA) incubation data |
Total alkalinity incubation data for coralline algae individuals and paired controls, ru in the last week of a laboratory experiment testing the effects of pH, light availability and biotic interaction on coralline algae calcification and productivity. |
High latitude kelp dynamics |
species |
Coralline algae growth |
Linear extension measurements of species from two common morphotypes of coralline algae found in Sitka Sound, AK. |
High latitude kelp dynamics |
species |
coral_calcification |
Calcification rates of 8 corals at varying pCO2 concentrations |
OA_Corals, MCR LTER |
species_coral |
Critical swimming speed |
Recorded critical swimming speed of larval Amphiprion percula, Elacatinus lori, and Elacatinus colini measured throughout development from hatching through settlement. |
Elacatinus Dispersal II |
sp |
Crustose coralline algae calcification experiment data |
|
CorallineAlgaePaleo-pH |
Species |
Crustose coralline algae skeletal density |
Skeletal density for crustose coralline algae reared in natural and experimental temperature and pCO2 conditions |
CorallineAlgaePaleo-pH |
Species |
Cryptophyte Cell Volumes |
|
Spectral Irradiance and Cryptophyte Biodiversity |
Species |
Culture Characteristics |
|
Plankton Interactions and VOC |
Algae, Bacteria |
Cultures isolated from A. bipinnata 2008-2016 |
Symbiodinium cultures isolated from adult colonies of the octocoral Antillogorgia bipinnata in 2008, 2013 and 2016, grown at either 26 or 30 degrees C |
Host Symbiont Temp Response |
Putative_Species, Host |
Cyanobacteria cultures used to generate DNA reference library |
Cyanobacteria cultures accessions |
Tango in the Mat World |
Species |
Damselfish Energetics |
|
Gnathiid isopod ecology |
species |
dataset1_Krug_et_al_2015: Suppl. Table 3: Accessions |
Table 3: accessions: COI, 16S, 28S. H3 for ~200 spp. |
PLDvFST |
species |
dataset2_Krug_et_al_2012: Elysia accessions |
Elysia spp. accessions for COI, 16S, H3 |
PLDvFST |
species |
dataset3_Supp1_Krug_et_al_2011: Elysia sequences |
Accessions for COI, 16S, H3 for 18 Elysia species |
PLDvFST |
species |
dataset4_Krug_et_al_2012: Philine sequences |
Accessions for 16S for Philine species |
PLDvFST |
species, invasion |
dataset5_Vendetti_et_al_2012: Elysia pusilla sequences |
Accessions for COI, 16S, H3 from Elysia pusilla and E. spp. |
PLDvFST |
species |
dataset6_Krug_et_al_2013: Sequences |
Accessions for COI, H3 for three species complexes |
PLDvFST |
species_or_morph |
dataset8- Oxynoe sequence data |
Species names, sample codes, and collection details for sequenced taxa used in phylogenetic analyses. |
PLDvFST |
species |
Delaware Bay Oyster Samples |
Delaware Bay oyster archived tissues NSF OCE-1756712 SEGO Project |
SeaGo |
Species |
DEPRECATED: Optical properties |
DEPRECATED: Optical properties 2016 & 2017 |
Varadero Reef |
Species |
Depth ranges for global mesophotic reefs |
Depth ranges of occurrence on reefs |
MCESponge |
Species |
Diatom amplicon sequencing variants from Narragansett Bay 2008-2014 |
Diatom amplicon sequencing variants from Narragansett Bay 2008-2014 |
NBPTS, Phytoplankton Community Responses, NES LTER |
Species |
Diatom cultures used to generate DNA reference library |
Diatom culture accessions |
Tango in the Mat World |
Species |
Diatom growth rates |
Cell growth rates from samples obtained on LMG1411. |
Polar_Transcriptomes |
species |
Dinoflagellate culturing |
Size and chemical responses of two dinoflagellate species used in natural high light exposure experiments. |
Protist signaling |
Dinoflagellate_species |
Dinoflagellate Evo |
Comparing short vs. long term acclimation of a dinoflagellate community |
Plankton acclimation |
species |
Dinoflagellate Functional Response during Microplastic Feeding |
Effect of microplastic ingestion on heterotrophic dinoflagellate functional responses |
Planktonic Herbivore Temp Dependence |
Species |
Dinoflagellate Microplastic Ingestion Rates |
Effect of microplastic ingestion on heterotrophic dinoflagellate ingestion rates |
Planktonic Herbivore Temp Dependence |
Species |
Disko Bay Growth Rates |
Growth rates of dominant plankton across 3 temperature treatments |
Planktonic Herbivore Temp Dependence |
Species |
Distribution of Elacatinus lori settlers |
Distribution Elacatinus lori settlers on sponge habitat. |
Elacatinus Dispersal II |
Sp_species |
Distribution of new settler Elacatinus lori settlers |
Distribution of new Elacatinus lori settlers arriving on sponge habitat. |
Elacatinus Dispersal II |
Sp_species |
Diurnal gnathiid consumption |
|
Gnathiid isopod ecology |
Common_Name, Species |
Diver-collected jellies RHB-0603 |
Diver-collected jellies from S.W. North Atlantic |
CMarZ_2004-2010 |
species |
dogfish_alloys |
spiny dogfish and rare earth metals |
NEC_ProjDev |
species |
doggrate_catch |
DOGGRATE: Development of a Spiny Dogfish Excluder in a Raised Footrope Whiting Trawl: catch data |
NEC_ProjDev |
species |
Domel_2017_T1: Pallenopsis patagonica specimen and outgroups with accessions |
Pallenopsis patagonica specimen and outgroups with accessions |
Antarctic Inverts |
species |
Duquette et al. 2018: Mg/Ca ratios |
Mg/Ca ratios |
OA_Antarctic_organisms, Antarctic Inverts |
species |
DWH_micronekton |
abundances of mesopelagic micronekton from the Deepwater Horizon Oil Spill area, 2010-2011 |
DWH Micronekton |
species |
Edge effects and fragmentation literature review |
Edge effects and fragmentation literature review |
Habitat Fragmentation |
sg_spp |
Effect of lionfish density on native reef fishes |
Effect of lionfish densities on native coral-reef fishes |
BiodiversityLossEffects_lionfish |
species |
Effect of lionfish in main seagrass habitats |
Effect of lionfish presence on native fish abundance in main reefs where lionfish resided. |
BiodiversityLossEffects_lionfish |
species |
Effect of lionfish in seagrass open area habitats |
Effect of lionfish presence on native fish abundance in open areas. |
BiodiversityLossEffects_lionfish |
species |
Effect of lionfish in seagrass satellite coral head habitats |
Effect of lionfish presence on native fish abundance on satellite coral heads. |
BiodiversityLossEffects_lionfish |
species |
Effect of lionfish in standardized habitat units in seagrass |
Effect of lionfish presence on native fish abundance in standardized habitat units. |
BiodiversityLossEffects_lionfish |
species |
Egg sizes and macromere allocation |
Egg sizes and macromere allocation for diverse annelids and molluscs |
Ciliated Larvae Feeding |
species |
Emerald Reef Seasonal Monitoring, 2014-2015 |
Coral species sample collection log, Emerald Reef, 2014-2015 |
Reef coral symbioses |
species |
ENAB 2008 Protobranchs |
Counts of Protobranch bivalves collected in a series of epibenthic sled samples taken in the western North Atlantic. |
ENAB |
species |
Epibenthic community taxonomy |
Epibenthic community taxonomic hierarchy and sampling method in Aleutian Island kelp forests, 2016-2017 |
Kelp Forest Ecosystem Engineer Loss |
Species |
Etelis genetics |
|
Hawaiian Fish Origins |
Species |
Etelis morphology |
|
Hawaiian Fish Origins |
Species |
Etelis spp. rangewide genetic data |
|
Hawaiian Fish Origins |
Species |
Eunicea flexuosa interactions |
Data from surveys of Eunicea flexusa colonies that were found in close proximity. |
VI Octocorals, St. John LTREB |
species |
Experimental coral treatments |
DNA results of Pocillopora cf. meandrina and Acropora hyacinthus |
Moorea Virus Project |
Species |
Experimental seawater chemistry |
Experimental seawater chemical properties for larval mussel shell study |
OA_Proxies |
species |
fairy basslet counts post-invasion |
Counts of fairy basslet on Bahamian reefs after invasion by red lionfish. |
Lionfish Invasion |
species |
Fatty acid measurements - experimental animals |
|
Egg Boon Food Webs |
Taxon |
Fatty acid profiles |
Fatty acid profiles of M. menidia females and their unfertilized eggs. |
HYPOA |
Species |
Fauna on restored oyster reefs |
Fauna on restored oyster reefs |
Seagrass and Oyster Ecosystems |
species |
Fecundity Trial |
Fecundity Trial |
HYPOA |
Species |
Fecundity Trial - Egg Measurements |
Fecundity Trial - Egg Measurements |
HYPOA |
Species |
Feeding Assays |
Feeding Assays |
High latitude kelp dynamics |
Sp |
Final Physiology |
Final Physiology |
EAGER-CBASS |
Species, Genotype |
Final spores |
The effect of pH on the attachment of Corallina vancouveriensis spores final |
OA - Ecomaterials Perspective |
Species |
Fish count data |
Percent coverage of coral, algae, and inverts. |
DisturbImpactsCoral |
species, type |
Fish Flight Initiation Distance Data |
|
Galapagos diver disturbance |
Species_Name |
Fish lengths - adults |
adult fish lengths |
Larval Dispersal in Kelp Rockfish |
species |
Fish lengths - juveniles |
juvenile fish lengths |
Larval Dispersal in Kelp Rockfish |
species |
Fish roadside surveys 2014-2015 |
Weekly survey of fish sold by the roadside in Moorea, French Polynesia, 2014-2015 |
Coral reef fishery |
species |
Fish species code key |
Fish species code key |
Larval Dispersal in Kelp Rockfish |
species |
fish species counts |
Fish species counts in 3, 20x40 m transects, Panama (1980-2010) |
EPac Corals 1982/82 El Nino: VI, EPac Corals 1982/83 El Nino: III, EPac Corals 1982/83 El Nino: II, EPac Corals 1982/83 El Nino: IV, EPac Corals 1982/82 El Nino: V, EPac Corals 1982/83 El Nino: I, EPac Corals 1982/82 El Nino: VII |
species |
Fish species survey |
Survey of fish species on each study site. |
BiodiversityLossEffects_lionfish |
species |
Fish stoichiometry |
Body stoichiometry of coral reef fishes from the Indo-Pacific |
Fish Derived Coral Nutrients |
species |
Fish Surveys |
|
Reef Production Drivers |
Species |
Fish surveys at hydrophone sites |
Fish densities and sizes, Bahamas, 2015-2016 |
Fish and biogeochem hot spots |
species |
fish_abund |
Fish abundance data from MOC-10 trawls. |
SOGLOBEC |
species |
FL Multispecies Otolith Data |
Multispecies larval otolith increment data from the Straits of Florida, 2007-08. |
FK Population Connectivity |
species |
Foram B-Ca and Mg-Ca |
B:Ca and Mg:Ca isotopes in foraminifera from sediment cores |
OA_Paleocene-Eocene |
species |
foram community specimen measurements |
Foram lengths and widths |
OA, Hypoxia and Warming |
taxon |
Fv/Fm |
Fv/Fm |
EAGER-CBASS |
Species, Genotype |
Geange_2010 Larger Heterospecifics Field Assay experiment |
This dataset is from a study examining the influence of structural refuge, competition and their interaction on the early post-settlement survival of transplanted Thalassoma hardwicke (the sixbar wrasse). |
CDD_in_Reef_Fish |
competitor |
Geange_2010 Larger Heterospecifics Habitat Association |
This dataset is from a study examining the influence of structural refuge, competition and their interaction on the early post-settlement survival of transplanted Thalassoma hardwicke (the sixbar wrasse). |
CDD_in_Reef_Fish |
species |
Geange_and_Stier_2009 Order of Arrival |
This dataset is from a manipulative experiment investigating intracohort priority effects between two competing reef fishes (Thalassoma hardwicke and T. quinquevittatum). |
CDD_in_Reef_Fish |
focal, competitor |
Geange_and_Stier_2009 Order of Arrival Background Community |
This dataset is from a manipulative experiment investigating intracohort priority effects between two competing reef fishes (Thalassoma hardwicke and T. quinquevittatum). |
CDD_in_Reef_Fish |
species |
Geange_and_Stier_2009 Order of Arrival Size |
This dataset is from a manipulative experiment investigating intracohort priority effects between two competing reef fishes (Thalassoma hardwicke and T. quinquevittatum). |
CDD_in_Reef_Fish |
species |
Geange_et_al_2013 Competitive Hierarchies |
This dataset is from a manipulative experiment the relative competitive abilities of juveniles of three closely related species of reef fish (bird wrasse, Gomphosus varius; fivestripe wrasse, T. quinquevittatum; and the sixbar wrasse, Thalassoma hardwicke |
CDD_in_Reef_Fish |
focal, competitor |
Geange_et_al_2013 Competitive Hierarchies Background Community |
This dataset is from a manipulative experiment the relative competitive abilities of juveniles of three closely related species of reef fish (bird wrasse, Gomphosus varius; fivestripe wrasse, T. quinquevittatum; and the sixbar wrasse, Thalassoma hardwicke |
CDD_in_Reef_Fish |
Species |
Geange_et_al_2013 Competitive Hierarchies Lengths |
This dataset is from a manipulative experiment the relative competitive abilities of juveniles of three closely related species of reef fish (bird wrasse, Gomphosus varius; fivestripe wrasse, T. quinquevittatum; and the sixbar wrasse, Thalassoma hardwicke |
CDD_in_Reef_Fish |
species |
Gill 16S rRNA amplicon sequencing |
GenBank Short Read Archive (SRA) sequence accession numbers for 16S rRNA gene amplicon data from the gills of Alviniconcha species, Ifremeria nautilei, and Bathymodiolus septemdierum. |
Eco Dyn W Pacific Vents |
Species |
Gill Net Catch Data |
|
Texas Coastal Fish |
Species_Latin_Name |
Glaucus species COI and 16S positions and bases |
Dataset for Glaucus Study II: locality data, GenBank and museum voucher numbers, with molecular synapomorphies |
Neuston Phylogeny |
species |
Glaucus spp vouchers and accession numbers |
Glaucus specimen collection locations, museum vouchers and GenBank accession numbers |
Neuston Phylogeny |
species |
Gnathiid blood meal identification results |
|
Gnathiid isopod ecology |
Host_ID |
GoM WBTS 2012-2013 Zooplankton abundance |
Zooplankton species abundance from ring nets at two times series stations in the Gulf of Maine - 2012-2013 |
GoM_Calanus_2012-2013 |
species |
GoM WBTS 2012-2013 Zooplankton abundance Columnar View |
Zooplankton species abundance from ring nets at two times series stations in the Gulf of Maine - 2012-2013 |
GoM_Calanus_2012-2013 |
species |
Grazing assays |
Grazing preferences by herbivorous fish. |
BiodiversityLossEffects_lionfish |
species |
Growth Month 4 and 16 |
Percent growth of corals in experimental plots for month 4 and month 16 |
Killer Seaweeds |
Species |
growth phase exopolymers |
Exopolymer and carbohydrate production by diatoms with growth. |
Diatom EPS Production |
species |
Growth Rates of Dinoflagellates fed Microplastics |
Effect of microplastic ingestion on heterotrophic dinoflagellate growth rates |
Planktonic Herbivore Temp Dependence |
Species |
GSC urchin grazing |
Experiment testing the temperature dependence of urchin grazing at the Galapagos Science Center on San Cristobal Island from February to March 2018 |
Temperature and Herbivory |
Species |
Guaymas Basin vent copepods |
Abundance of calanoid copepods found Guaymas Basin deep-sea vent field |
Vent Benthos |
species |
HADES-K - Specify Export 201305190833 Final |
HADES-K - Specify Export 201305190833 Final |
HADES |
Species |
HADES-M - AMPHIPOD COLLECTION |
HADES-M - AMPHIPOD COLLECTION |
HADES |
SPECIES |
HADES-M - FISH COLLECTION |
HADES-M - FISH COLLECTION |
HADES |
SPECIES |
HADES-M - OTHER MEGAFAUNA COLLECTION |
HADES-M - OTHER MEGAFAUNA COLLECTION |
HADES |
SPECIES |
Halanych-Kocot_2014_T1: NCBI accessions |
Antarctic invertebrate collection locations and NCBI SRA accessions |
Antarctic Inverts |
species |
Halanych-Kocot_2014_T3: Best TLR genes from BLASTP search |
Best toll-like receptors (TLR) genes from Lophotrochozoa BLASTP search |
Antarctic Inverts |
Species_best_hit |
Halanych_2013_T1: NCBI accessions |
NCBI accessions |
Antarctic Inverts |
species |
Haplotypes Moorea 2019 |
Haplotypes Moorea 2019 |
Pocilloporid Coral Diversity |
Species_haplotype, Species |
Harder_2016_T1: sea spider Pallenopsis sampling sites and COI NCBI accessions |
Sea spider Pallenopsis sampling sites and COI NCBI accessions |
Antarctic Inverts |
species |
Hatch Source E1E2 |
Hatch Source E1E2 |
HYPOA |
Species |
Havird_2015_T1: NCBI accessions: COX and PXDN |
NCBI accessions |
Antarctic Inverts |
Organism |
Havird_2015_T2: NCBI accessions: MPO and PXDN |
NCBI accessions: MPO and PXDN outgroups |
Antarctic Inverts |
Organism |
Heatwave Experiment: Color Score Physiology |
Heatwave Experiment: Color Score Physiology |
Holobiont Integration |
Species |
Heatwave Experiment: Growth Rates |
Heatwave Experiment: Growth Rates |
Holobiont Integration |
Species |
Heatwave Experiment: Multivariate Physiology |
Heatwave Experiment: Multivariate Physiology |
Holobiont Integration |
Species |
Heatwave Experiment: Photosynthetic Irradiance |
Heatwave Experiment: Photosynthetic Irradiance |
Holobiont Integration |
Species |
Heatwave Experiment: Survivorship Probability |
Heatwave Experiment: Survivorship Probability |
Holobiont Integration |
Species |
Herbivorous protist abundances under simultaneus manipulation of temperature and nutrients |
|
Planktonic Herbivore Temp Dependence, Phytoplankton Community Responses |
Morphospecies |
Howell fish catch data |
numerical abundance, catch-per-unit-effort, percent composition |
NEC_ProjDev |
species |
Hydrothermal vent parasite species reported in published literature |
Literature review of deep-sea hydrothermal vent parasite, egg predator, and micropredator species |
EPR Functional Diversity |
PARASITE_SPECIES_PUBLICATION_ID, PARASITE_SPECIES, HOST_SPECIES_PUBLICATION_ID, HOST_SPECIES |
Identity and Heights of Octocoral Species |
|
Octocoral Community Dynamics |
Species |
iioe_chaetognaths |
Chaetognaths recorded during the International Indian OceanExpedition (IIOE) 1960-1965 |
IIOE |
species |
iioe_mysids |
Counts of Mysidacea species collected during the International Indian Ocean Expeditions, 1962-1965. |
IIOE |
species_WoRMS, species_orig |
iioe_ostracods |
Ostracods recorded from the Northern Indian Ocean, North of 10 degrees South |
IIOE |
species |
Incidence of volume effect |
Volume-dependent offsets in NO3- N and O isotope ratios of reference materials |
Biological Nitrogen Isotope Fractionation |
Strain |
Initial predator preferences |
Initial hunting preferences of predator species. |
BiodiversityLossEffects_lionfish |
predator_species, first_species |
Initial spores |
The effect of pH on the attachment of Corallina vancouveriensis spores initial |
OA - Ecomaterials Perspective |
Species |
Integrated Euphausiid Abundance and Zooplankton Biomass |
Gulf Stream Warm-Core and Cold-Core Rings integrated Euphausiid abundance and zooplankton biomass from 1970s, 1980s; column view |
NAtlDarkData |
species |
Integrated Euphausiid Abundance and Zooplankton Biomass restructured |
Gulf Stream Warm-Core and Cold-Core Rings integrated Euphausiid abundance and zooplankton biomass from 1970s, 1980s |
NAtlDarkData |
species |
invertebrate survey counts |
Invertebrate survey counts in the rocky intertidal zone, 2004-2013 |
Intertidal Diversity |
species |
Irradiance exposure experiments |
Photophysiological responses of two dinoflagellate species used in natural high light exposure experiments |
Protist signaling |
Dinoflagellate_species |
Isolate information |
Isolate information on genes found in samples collected on LMG1411. |
Polar_Transcriptomes |
polar_diatoms |
Isolation culturing and sequencing of bacteria and viruses |
Environmental data describing microbes and viruses submitted to NCBI to generate BioSample accession numbers. |
Marine Bacterial Viruses |
organism |
ITS_sequence_accessions |
Diatom ribosomal DNA sequence accession numbers. |
Diatom Gene Flow |
species |
Janosik_2013_T3: matrix of Odontasteridea morphological characters |
Matrix of Odontasteridea morphological characters |
Antarctic Inverts |
species |
JeDI |
Jellyfish Database Initiative: Global records on gelatinous zooplankton for the past 200 years |
Trophic BATS |
rank_species |
JTMD amphipod Caprella lengths |
Amphipod Caprella size and development collected on Japanese tsunami marine debris |
JTMD-BF |
species |
JTMD amphipod Jassa lengths |
Amphipod Jassa size and development collected on Japanese tsunami marine debris |
JTMD-BF |
species |
JTMD Mytilus population genetics |
Population analysis and metagenomics of Japanese tsunami marine debris mussels |
JTMD-BF |
species |
Juvenile Black sea bass winter growth and lipid accumulation under varying food and temperature conditions - Experiment 1 |
Juvenile Black sea bass winter growth and lipid accumulation under varying food and temperature conditions - Experiment 1 |
HYPOA |
Species |
juvenile coral calcification |
Calcification by primary coral polyps under high bicarbonate and low pH |
OA Nutrition and Coral Calcification |
species |
Juvenile Urchin Data |
Juvenile Urchin Data |
Ecology of Cloning |
Species |
juv_fish_bycatch_redux |
Species counts from control and gear manipulation trials to reduce bycatch of juvenile fish. |
NEC_ProjDev |
species |
Kelp Growth |
Kelp Growth |
High latitude kelp dynamics |
Sp |
Kelpforest All Nodes |
All nodes from the the eastern Pacific Kelpforest database |
Kelp Forest Apex Predator Collapse |
working_name |
knotless codend_catch |
Knotless Codend Mesh Selectivity: fish catch data, Gulf of Maine, 2003 |
NEC_ProjDev |
species |
Krill abundance by species |
Krill raw counts and abundance sorted by species, Red Sea, Jan. 2014 |
Red Sea Krill |
species |
Krill barcodes |
Euphausiid DNA barcode metadata and accession numbers from global oceans |
Red Sea Krill |
species |
Krill densities |
Depth-stratified krill net samples |
PelagicHypoxia |
Species |
Larvae collected near Mariana Back-Arc hydrothermal vents in 2010 |
Larvae collected near Mariana Back-Arc hydrothermal vents in 2010 |
Mariana Back-arc Vents |
Species |
Larvae Density Morphometrics |
Body length, right postoral rod length, and stomach length of Dendraster excentricus and Lytechinus pictus larvae raised at three culture densities on two food rations. |
LIPs on Larval Feeding |
Species |
Larval fish identifications and concentrations |
Ichtyoplankton identifications and concentrations MOCNESS tows |
MEZCAL |
Species |
Lebetimonas Genomes |
Whole genome sequence data from bacterial isolates from venting fluids at NW Rota Seamount, collected in 2009 and 2010. |
NP Functional Gene Div |
species |
Length measurements |
Fish lengts sampled with MOCNESS in winter & summer 2018 & 2019 |
MEZCAL |
Species |
limpet aerial respiration |
Individual aerial respiration rate data for limpets from trials |
Experiments in a Model Ecosystem |
species |
limpet aquatic respiration |
Individual aquatic respiration rate data for limpets from trials |
Experiments in a Model Ecosystem |
species |
limpet mass and body volume |
Limpet mass and body volume data for respiration measurements |
Experiments in a Model Ecosystem |
species |
lionfish and goby counts |
Counts of Elacatinus gobies on Bahamian reefs with controlled lionfish densities. |
Lionfish Invasion |
species |
Lionfish and grouper density |
|
BiodiversityLossEffects_lionfish |
SPECIES |
lionfish cleaner bottle expt |
Cleaner and host species observed on Bahamian reefs under varying experimental conditions |
Lionfish Invasion |
species_cleaner1, species_cleaner2, species_cleaner3, species_client |
lionfish gnathiid experiments |
Experiments testing susceptibility of lionfish and reef fishes to parasitic gnathiid isopods. |
Lionfish Invasion |
host_species |
lionfish parasites |
Microparasites infecting lionfish at sites in their native and invaded ranges. |
Lionfish Invasion |
species |
Long-term Menidia menidia growth |
Long-term Menidia growth at contrasting CO2 levels. |
HYPOA |
species |
low-profile gillnets_catch data |
Low-Profile, Low-Bycatch Gillnets, Gulf of Maine, Stellwagon Bank, 2000-2002: catch data |
NEC-CoopRes |
species |
LTR - Thalassoma Surveys |
Long Term Reefs Thalassoma Surveys |
CDD_in_Reef_Fish |
Species |
LTVR - Thalasssoma |
Thalassoma Surveys on Long Term Vermetid Removal Reefs |
Vermetids_Corals |
Species |
LTVR - Vermetid Sizes in Quadrats |
Sizes of Vermetids on Long Term Vermetid Removal Reefs |
Vermetids_Corals |
Species |
Luminoxyscape maximum depth |
Luminoxyscape maximum depth |
Vision under hypoxia |
Species |
Mangrove snail predation |
Thais kiosquiformis snail predation in Panamanian mangroves |
Estuarine_Parasites |
species |
Mapping information and signs for individual diseased corals |
Data describing every diseased coral record from the surveys. |
Contagious coral diseases? |
species |
MarBio. 2016: calcification and biomass |
Coral biomass and calicification rate at 2 temperatures and 2 pCO2 levels |
OA_Corals |
species |
Mariana Back-arc Macrofauna 2014 |
Macrofauna collected on colonization panels at Snail Vent Field on the Mariana Back-arc in 2014 |
Mariana Back-arc Vents |
scientificName |
Marine algal sterols |
list of marine algal steroids used in zooplankton metabolic, growth and reproduction experiments |
PhytosterolsZooplank |
species |
marine mammal sightings |
Marine mammal (whale and penguin) sightings from Chile to the Western Antarctic Peninsula, 2000-2002 |
SOGLOBEC |
species |
Masirah Island Time Series: copepod abundance |
Masirah Island time series mesozooplankton abundance |
CRD FLUZiE, Arabian Sea Diapausing Copepods |
species |
MBRS Symbiodinium OTU |
Symbiodinium OTU |
Thermal History and Coral Growth |
species |
McIlroy_2016: Effective quantum yield for Orbicella faveolata recruits |
McIlroy_2016: Effective quantum yield for Orbicella faveolata recruits |
SymBioSys |
Symbiodinium |
McIlroy_2016: Growth of Orbicella faveolata recruits |
McIlroy_2016: Growth of Orbicella faveolata recruits |
SymBioSys |
Symbiodinium |
McIlroy_2016: Maximum quantum yield for Orbicella faveolata recruits |
McIlroy_2016: Maximum quantum yield for Orbicella faveolata recruits |
SymBioSys |
Symbiodinium |
McIlroy_2016: Symbionts genotypes in Orbicella faveolata |
McIlroy_2016: Genotype of symbionts detected in Orbicella faveolata recruits over time |
SymBioSys |
Symbiodinium |
McIlroy_2017: Symbionts genotypes in Orbicella faveolata |
McIlroy_2017: Genotype of symbionts detected in Orbicella faveolata recruits |
SymBioSys |
Symbiodinium_treatment |
McMurdo epifauna species list |
|
McMurdo Predator Prey, Antarctic Benthic Recovery, McMurdo Marine Benthos, SCINI |
Species |
McMurdo transects |
Epifaunal abundance and diversity in McMurdo Sound, Antarctica |
McMurdo Marine Benthos |
species |
McMurdo volcano sponge size |
Volcano sponge size on artificial substrates in McMurdo Sound, Antarctica |
McMurdo Marine Benthos |
species |
Menidia menidia - Genotyped Offspring |
Information about the offspring used in a study of survival of Menidia menidia larvae under high CO2 conditions. |
OA Fish |
species |
Menidia menidia - Genotyped Parents |
Genotyped parents used in a study of survival of Menidia menidia larvae under high CO2 conditions. |
OA Fish |
species |
MEPS 2015: linear extension |
Linear growth of individual Montipora and Porites corals competing for space in Moorea and Okinawa, MEPS, 2015 |
OA_Corals |
species |
Meta-analysis of oyster reef nekton |
Database summarizing independent studies of nekton taxa associated with oyster reefs |
Seagrass and Oyster Ecosystems |
scientific_name |
Metadata from meta-analysis on CovGE in phenotypic results |
Metadata from Meta-Analysis on CovGE in phenotypic results |
RCN ECS |
species |
Microbial isolates |
Microbial isolates from sediment samples collected at Paleochori Bay, Milos island, Greece |
Hydrothermal Autotrophic Carbon Fixation |
species |
Micronekton AA CSIA ALOHA: Amino acid specific isotopes in micronekton |
Amino acid specific isotopes in micronekton, station ALOHA |
Hg_Biogeochemistry |
SpeciesID |
Minutocellus polymorphus TEP and Microaggregate Formation: Cell Abundance |
|
Marine Plankton Aggregation |
Organism_counted |
MMETSP locations and e-values |
MMETSP location information on samples obtained on LMG1411. |
Polar_Transcriptomes |
species_max |
MOC zoop AK-LTOP |
AK-LTOP MOCNESS tow zooplankton abundance/biomass |
NEP |
species |
MOC10data_lengths |
Zooplankton length data from the 10m2 MOCNESS |
GB |
species |
MOC10_abund |
Zooplankton abundance data from the 10m2 MOCNESS |
GB |
species |
MOCNESS plankton composition and CTD data |
Species composition via MOCNESS and associated CTD information |
CopesPopDynHypoZone |
species |
Modeled thermal traits |
PFT Thermal Response - Modeled thermal traits |
Phytoplankton Community Responses |
name, speciesname, strain, species |
Modern deep-sea coral (Desmophyllum dianthus) nitrogen isotopes |
Deep-sea coral (Desmophyllum dianthus) nitrogen isotope data |
DeepSeaCoralNitrogen |
sci_name |
Molar Ratios |
|
Epigenetics to Ocean |
Species |
Mollusc voucher and accession numbers |
Mollusc museum voucher and GenBank accession numbers |
Neuston Phylogeny |
species |
monkfish_bycatch |
Bycatch in the Gillnet Fishery for Monkfish |
NEC-CoopRes |
species |
Morphometrics E1E2 |
Morphometrics E1E2 |
HYPOA |
Species |
mRNA sequencing - RNAseq |
mRNA sequencing - RNAseq |
OA pH, Temp, Calc Inverts |
Species_Name |
MtCOI sequence accessions - Pollicipes elegans |
Cytochrome oxidase I DNA sequences from Pollicipes elegans |
Gene flow across the tropics |
species |
Mud Patch foraminifera images |
Mud Patch foraminifera images |
OA, Hypoxia and Warming |
species |
Mussel dataset |
|
Costa Rica Seeps |
Species |
Mussel shell trace element ratios |
Larval mussel shell composition under high and low pH and O2 |
OA_Proxies |
species |
Native prey fish surveys |
Censuses of the native prey fish populations at the end of each survey. |
BiodiversityLossEffects_lionfish |
species |
Naupliar ingestion: MEPS 2017 |
Naupliar grazing by Parvocalanus crassirostris and Bestilina similis nauplii (uncorrected rates) |
EAGER: Copepod nauplii |
species |
NCBI accession numbers for RNAseq data from five coral species experimentally exposed to SCTLD |
NCBI accession numbers for RNAseq data from five coral species experimentally exposed to SCTLD |
Multi-Species Coral Disease |
Organism |
NCBI BioSample accessions for viruses and microbes |
NCBI issued accession numbers for BioSamples of microbes and viruses. |
Marine Bacterial Viruses |
organism |
Nearest neighbor surveys |
Data describing the nearest neighbor of sampled individuals. |
VI Octocorals, St. John LTREB |
species |
Nekton - Minnow trap data |
|
Harvey Seagrass |
Scientific_name |
Neocalanus Multinet |
|
Neocalanus Gulf of Alaska |
ScientificName |
Neogastropods - Table 1 - Neogastropods species - Presence 1 and absence 0 of North East Neogastropods |
Neogastropods - Table 1 - Neogastropods species - Presence 1 and absence 0 of North East Neogastropods |
Deep Sea Benthic Dynamics |
Species |
Niskin plankton composition and CTD data |
Species composition via niskin and associated CTD information |
CopesPopDynHypoZone |
species |
Nitrogen isotope fractionation for ammonium assimilation by marine phytoplankton |
|
Biological Nitrogen Isotope Fractionation |
Strain |
Nudibranch accession numbers |
Nudibranch accession numbers |
Neuston Phylogeny |
species |
nutrient trait data: cell volumes |
Phytoplankton nutrient traits and data sources |
Phytoplankton Traits |
species |
nutrient utilization traits and citations |
Phytoplankton nutrient traits and data sources |
Phytoplankton Traits |
species, synonym |
NWACS CAMEO Database - Fishery Independent Surveys |
Survey data from fishery independent surveys; part of the NWACS CAMEO database |
NW_AtlEcosysConnect |
species |
NWACS CAMEO Database - Landings |
Data on commercial fishing catches (landings); part of the NWACS CAMEO database |
NW_AtlEcosysConnect |
species |
NWACS CAMEO Database - Species |
Species metadata associated with the NWACS CAMEO database |
NW_AtlEcosysConnect |
scientific_name |
O exchange ratio |
Percentage of 0 atom exchange with water during denitrification |
Biological Nitrogen Isotope Fractionation |
Strain |
OA Feeding Physiology M. californianus |
Feeding physiology data of Mytilus californianus larvae in OA conditions |
Mechanisms of bivalve response to acidification |
species |
OA Modeled Growth M. californianus |
Modeled growth of Mytilus californianus larvae to pediveliger stage after acute acidification stress |
Mechanisms of bivalve response to acidification |
species |
Observed and modeled presence 1968-2014 |
|
CC Fishery Adaptations |
spp |
octocoral |
Transect surveys of octocoral species abundance |
Octocorals and Hurricanes |
Species_code, Genus_Species, Species |
octocoral transects - adult colony height |
Adult octocoral height measurements from transects |
VI Octocorals, St. John LTREB |
field_code |
Octocoral Recruitment |
|
Octocoral Community Dynamics |
Taxon |
Octocoral Recruitment |
Octocoral Recruitment 2014-2019 |
Octocoral Community Dynamics, VI Octocorals |
Species_code, Species_name |
Octocoral size frequency |
Size frequency |
St. John LTREB, VI Octocorals |
Species |
Octocoral transects - species list |
Octocoral species list |
VI Octocorals, St. John LTREB |
species |
Octocorals at East Cabritte and Europa Bay |
Octocorals on St. John |
St. John LTREB, VI Octocorals |
species |
Oculina coral OA expt |
Calcification and linear extension rates for Oculina arbuscula corals grown under different pCO2 levels. |
OA Nutrition and Coral Calcification |
species |
oithona_abund |
Abundance data of Oithona species from the Pacific and Indian Oceans Related data object: Oithona station data |
Nishida-Oithona |
species |
oithona_depth |
Abundance of Oithona species by depth from the Pacific + Indian Oceans |
Nishida-Oithona |
species |
Organic matter composition of the dominant plants |
Organic matter composition of the dominant plant communities in and around three high marsh ponds within PIE-LTER. Data were collected in the summer of 2014. |
Benthic_PP_at_TIDE |
Plant |
Otolith microstructure |
Otolith microstructure of young-of-year Atlantic silversides from Mumford Cove 2015 |
HYPOA |
Species |
OTU and Sequences |
OTU and sequences |
St. John LTREB, RUI-LTREB |
OUT_Ancestral_ITS2_type |
oxidative stress TEP |
Exopolymer production by phytoplankton under oxidative stress. |
Diatom EPS Production |
species |
Oxygen Metrics |
|
Vision under hypoxia |
Species |
Oyster Mussel Carbonate Responses |
Chemistry and organism response data from Waldbusser et al. 2015, Nature Climate Change. |
Mechanisms of bivalve response to acidification |
species |
Palatability of algal species |
Palatability of non-native alga |
Genetic Adaptation Marine Inv |
GenSpec |
Palau-Sp 2018 Biometrics Experiment |
|
Thermally tolerant coral |
Species, Symbiont |
Palau-Sp 2018 PAM Experiment |
|
Thermally tolerant coral |
Species, Symbiont |
pangaea_zoo |
Multinet zooplankton data - mostly copepods - from ANT-XII/2 |
CMarZ_2004-2010 |
species |
Parasite taxonomic and life cycle information |
Literature review metazoan parasite species |
EPR Functional Diversity |
PARASITE_SPECIES_NAME, PARASITE_SPECIES |
Parrotfish species information |
Parrotfish species info |
Coral Reef Adjustment |
Species |
Parrotfish surveys |
Parrotfish surveys |
Coral Reef Adjustment |
species |
Pen Bay Archaeofish |
C and N isotope data of archaeological fish bones from Penobscot Bay. |
Isotopes and Fish Diets GoM |
species |
Percent cover of sessile invertebrates and algae |
Percent cover of sessile invertebrates and algae. |
Kelp_Forest_Resilience |
classcode |
Persistence of Elacatinus lori settlers on sponge habitat |
Persistence of Elacatinus lori settlers on sponge habitat. |
Elacatinus Dispersal II |
Sp_species |
phagotrophic protist accession numbers |
Links to GenBank accession numbers for 18S rDNA |
Feeding responses of marine protists |
species |
Phenotypic plasticity of the ciliated band of early echinoderm larvae |
|
LIPs on Larval Feeding |
Species |
Photosynthesis and Respiration |
Photosynthesis and Respiration |
EAGER-CBASS |
Species, Genotype |
Photosynthesis-Irradiance curve (P-E) |
Photosynthesis-Irradiance curve |
Varadero Reef |
Species |
Physiology of Montipora capitata and Porites compressa in response to marine heatwaves |
|
Mcap pairs time series |
Species |
Phytoflux_BATS |
BATS phytoplankton and cyanobacteria DGGE DNA data |
Plankton particle flux |
id_closest_match, id_closest_cultured_match |
Phytoplankton abundances |
Phytoplankton cell counts at 3 pCO2 levels and 2 temperatures before and after 12 month conditioning |
Plankton acclimation |
species |
Phytoplankton Orientation - 4 Diatom Species |
Phytoplankton Orientation - 4 Diatom Species |
Phytoplankton Orientation |
Species |
phytoplankton taxonomy |
CARIACO time series Phytoplankton taxonomy from samples collected during CTD/Niskin casts |
CARIACO |
SpeciesNameOriginal, SpeciesNameCleaned, ScientificName_accepted |
Phytoplankton_Physiology_Fe_Temperature |
Phytoplankton physiology with iron and temperature interactions |
Ross_Sea_Microb_Ecophys |
species_strain |
Pigment absorbance |
Absorbance of coral Orbicella faveolata from Rosaria and Varadero reefs, 2016 & 2017 |
Varadero Reef |
Species |
Plot Gastropod Densities |
Densities of corallivorous gastropods in 36 cm × 36 cm plots |
Killer Seaweeds |
Species |
Plot Macroalgal Biomass Month 16 |
Macroalgal biomass at month 16 in experimental plots on a fringing reef in Fiji. |
Killer Seaweeds |
Species |
Plot Macroalgal Cover Month 4 |
Macroalgal cover at month 4 in experimental plots on a fringing reef in Fiji. |
Killer Seaweeds |
Species |
Pocillopora haplotypes at Moorea by site and depth |
Pocillopora haplotypes at Moorea by site and depth |
Pocilloporid Coral Diversity |
Species_haplotype |
Polychaete DNA sequences |
DNA sequence data deposited on GenBank for polychaetes used in the project studying the evolution and mechanics of burrowing. |
Burrowing polychaete mechanics |
species |
Polychaete movement videos |
Videos of polychaetes burrowing and swimming. |
Burrowing polychaete mechanics |
species |
Polychaetes - Table 1 - Polychaetes species matrix - Species presence 1 and Absence 0 by station |
Polychaetes - Table 1 - Polychaetes species matrix - Species presence 1 and Absence 0 by station |
Deep Sea Benthic Dynamics |
SPECIES |
Porites asteroides and Diploria labyrinthiformis calcification |
|
BEACON |
Species |
Porites growth_respiration_photophys |
Porites growth, respiration, and photophysiology and seawater carbonate chemistry |
MCR LTER |
species |
Predator effects on settlement |
|
BiodiversityLossEffects_lionfish |
SPECIES |
predator surveys Eleuthera |
Size of predators observed during dedicated reef predator searches at Eleuthera, Bahamas. |
Lionfish Invasion |
species |
predator surveys LSI |
Predators observed at reefs near Lee Stocking Island, Bahamas |
Lionfish Invasion |
species |
Presence and absence of iron and light-related functional genes |
Protein information obtained from samples collected on LMG1411. |
Polar_Transcriptomes |
species |
Propagule counts of community experiment |
Foram species counts from propagule experiment with varying CO2, O2, and temperature |
OA, Hypoxia and Warming |
species |
ProteOMZ Exclusive Peptide Level Spectral Counts |
|
ProteOMZ (Proteomics in an Oxygen Minimum Zone), MM Saito |
Species |
ProteOMZ Protein Level Spectral Counts |
Total spectral count of proteins from R/V Falkor cruise 160115 for the ProteOMZ expedition in the Central Pacific in 2016. |
ProteOMZ (Proteomics in an Oxygen Minimum Zone) |
best_hit_species |
Pseudo-nitzschia amplicon sequence variants (ASVs) |
Pseudo-nitzschia asv |
C-AIM |
Pseudo_nitzschia_species |
pteropod respiration |
Respiration rates of thecosome pteropod exposed to various O2 and CO2 concentrations |
OAPS |
species |
pteropod shell dissolution |
Pteropod shell dissolution in natural and high-CO2 environments. |
OA Nutrition and Coral Calcification |
species |
PULSE zooplankton abundance |
Zooplankton species abundance, 1999-2004: Coop. Long-term Ecological Monitoring Project (PULSE), Gulf of Maine |
NEC-CoopRes |
species |
Quantification of ciliated band length per unit protein: biometric data |
|
LIPs on Larval Feeding |
Species |
Quantification of ciliated band length per unit protein: protein data |
|
LIPs on Larval Feeding |
Species |
Quantitative PCR: Dilution test |
Quantitative PCR: Dilution test |
EAGER: Copepod nauplii |
FocalSpecies |
Quantitative PCR: Individuals |
Quantitative PCR: Individuals |
EAGER: Copepod nauplii |
Species |
raised web gillnets_catch |
Testing Raised-Webbing Gillnets to Reduce Bycatch of Cod While Targeting Pollock: catch data |
NEC_ProjDev |
species |
Raman Spectra of Bivalve Larvae |
Raman spectra from several different bivalve species. |
Raman Spec Bivalves |
species_name |
Range_Taxonomy_LifeHistory |
Database of marine invertebrate dispersal parameters and species ranges |
CoastBenthBiogeo |
genus_species |
Range_Taxonomy_LifeHistory_Location |
Database of marine invertebrate dispersal parameters and species ranges |
CoastBenthBiogeo |
genus_species |
red crab camera_animals seen |
Red Crab stock assessment project, Northeast US slope waters, 2004-2005: animals seen in camera sled photos |
NEC-CoopRes |
species |
Red Sea Gradient Fv/Fm |
Red Sea Gradient Fv/Fm |
EAGER-CBASS |
Species |
Red Sea Gradient Physiology |
Red Sea Gradient Physiology |
EAGER-CBASS |
Species |
Red Sea Gradient Visual Bleaching |
Red Sea Gradient Visual Bleaching |
EAGER-CBASS |
Species |
Reef biogeochemistry, metabolomics, and metagenomics |
Reef biogeochemistry, metabolomics, and metagenomics |
Coral Exometabolomes |
host |
Reef Fish Genetic Accessions 2019 |
Hawaiian Reef Fish Genetic Accessions |
Hawaiian Fish Origins |
Species_Name |
reef fish surveys |
Results of fish surveys on experimental reefs at Lee Stocking Island, Bahamas. |
Lionfish Invasion |
species |
Regional Acropora cervicornis population data |
Acropora cervicornis population data during bleaching events |
EMUCoReS |
species |
Remineralization Experiments |
Remineralization experiments to assess the ability of natural assemblages of bacteria to utilize DOM produced under Si and N limitation. |
SBDOM, SBC LTER |
species |
respiration and photosynthesis I |
Biomass-normalized dark respiration and net photosynthesis rates in coral and algae as a function of pCO2 tested in both 2011 and 2012, Moorea LTER site |
OA coral adaptation |
species |
respiration and photosynthesis II |
Biomass-normalized dark respiration and net photosynthesis rates in coral and algae as a function of pCO2 where LEDR (light-enhanced dark respiration) was measured |
OA coral adaptation |
species |
Respiration trials summary |
Shark acceleration and oxygen consumption trials summary |
Shark Metabolic Rate |
species |
respiration-excretion rates - fish |
Mean respiration and excretion rates for fish |
SOGLOBEC |
species |
respiration-excretion rates - micronekton |
Mean respiration and excretion rates for micronekton |
SOGLOBEC |
species |
respiration-excretion rates - plankton |
Mean respiration and excretion rates for plankton |
SOGLOBEC |
species |
Retinal Response |
|
Vision under hypoxia |
Species |
RHB_ostracods |
Ostracod species from the Ron Brown cruise - Sargasso Sea |
CMarZ_2004-2010 |
species |
RI Community Data |
An archive of the fish and inveterate data from the RIDEM juvenile fin-fish survey across 6 of the Rhode Island salt ponds |
Seagrass and Oyster Ecosystems |
Scientific_Name |
Richness of experimental marine invertebrate communities across latitude |
|
Competition and Predation across Latitude |
MorphName |
RNA sequences |
NCBI RNA accessions for multi-stressor conditions of polar fishes |
polar_fish_adapt |
species |
RNAseq data used to identify viral genomes |
Alphaflexivirus Genomes in Stony Coral Tissue Loss Disease-Affected, Disease-Exposed, and Disease-Unexposed Coral Colonies in the U.S. Virgin Islands |
Multi-Species Coral Disease |
Organism |
Rockfish hypoxia experiments |
Data from experiments testing the effects of hypoxia on behavior and physiology of two species of rockfish |
OA Hypoxia Rockfish |
Species |
salmon_biodata |
salmon length, weight, sex, stomach data, 2001-2004 |
NEP |
species_common_name |
salmon_hauldata |
haul data and salmon numbers caught and processed; 2001-2004 |
NEP |
species |
salmon_juv_diet |
juvenile salmon diet, 2001-2003 |
NEP |
species |
salmon_thermal |
salmon otoliths - hatchery thermal marks, 2001 - 2004; Gulf of Alaska |
NEP |
species |
Salp Gut Carbon Content |
Salp Gut Carbon Content |
Salp Food Web Ecology |
Species |
Salp Gut Particle Sizes |
Salp Gut Particle Sizes |
Salp Food Web Ecology |
Species |
Sample locations of neustonic nudibranch Glaucus spp. |
Location data for genetic samples of nudibranch Glaucus atlanticus from global gyre systems |
Neuston Phylogeny |
species |
Sand lance morphometrics |
|
OA Stellwagen Sand Lance |
species |
Sand lance survival |
Survival of northern sand lance Ammodytes dubius offspring under factorial CO2 x temperature conditions |
OA Stellwagen Sand Lance |
species |
Scale contractions |
TM15N (TM18O) scale contraction calculated as the percent deviation of the difference between measured TM15N (TM18O) values of IAEA-NO3 and USGS-34 from the true difference |
Biological Nitrogen Isotope Fractionation |
Strain |
Sclerosponge paleoceanography |
Elemental ratios in Western Pacific sclerosponges |
Sclerosponges |
Species |
Scup and windowpane flounder expanded lengths |
Scup and windowpane flounder expanded lengths table |
Windowpane Bycatch |
species |
Scup and windowpane flounder length frequency |
Scup and windowpane flounder length frequency |
Windowpane Bycatch |
species |
Scup and windowpane flounder length frequency counts |
Scup and windowpane flounder length frequency count |
Windowpane Bycatch |
species |
Sea star sample information: Dutch Harbor, AK |
Sea star sample information |
Sea Star Microbiology |
Species |
Sea star sample information: Ketchikan, AK |
Sea star sample information |
Sea Star Microbiology |
Species |
Seagrass nutrients post-Hurricane |
Nutrient content and stable isotope ratios from seagrasses in Texas over one year following Hurricane Harvey |
Hurricane impacts on seagrasses |
Species |
seals_general |
General information relative to Seal data collection |
Crabeater Seal Foraging, SOGLOBEC |
species |
seals_morphometrics |
Seal morphometrics |
SOGLOBEC, Crabeater Seal Foraging |
species |
seal_counts_2008 |
Visual estimates of seal abundance from 2008 aerial surveys of the Salish Sea. |
Seal_response_to_prey |
species |
seal_prey_species_counts |
Counts of prey species found in harbor seal scat samples. |
Seal_response_to_prey |
species |
Seawater and Extrapallial fluid Concentration |
|
Epigenetics to Ocean |
Species |
seaweed growth |
Seaweed growth, palatability, and chemical defense (anti-coral and anti-herbivore) following 8 days of contact with a coral competitor. |
Killer Seaweeds |
species |
seaweed palatability |
Palatability of Galaxaura & Sargassum to herbivores |
Killer Seaweeds |
species |
SECM fish catch |
Fish catch data 1997-2006 in Southeastern Alaska |
NEP |
species |
SECM fish size and stomach contents |
Fish length, weight and stomach contents (prey) data, 1997-2006 in Southeastern Alaska |
NEP |
species |
SECM_zoop |
Zooplankton counts for the Southeast Alaska Coastal Monitoring |
NEP |
species |
SEEPC Bivalve DNA Barcoding Results |
Bivalve larvae DNA barcode results |
SEEPC |
species |
Sequencing Reads |
Accession numbers |
KeysCoralPopgen |
Organism |
Settling response of sand dollar D.excentricus to turbulence (BMC Zoology) |
Figs 1, 2, 3, BMC Zoology |
Turbulence-spurred settlement |
species |
Shark respirometry: temperature corrections |
Nurse shark acceleration and oxygen consumption in cold and warm water |
Shark Metabolic Rate |
species |
Shell Concentrations |
|
Epigenetics to Ocean |
Species |
Shima et al 2010 experimental |
These data are from the field experiment conducted to determine the effects of Ceraesignum (Dendropoma) maximum on coral growth and survival. |
Vermetids_Corals |
Species |
shrimp_nordmore_bycatch |
Bycatch of regulated species and the nordmore grate in the Gulf of Maine shrimp fishery |
NEC-CoopRes |
species |
Site locations and species sampled |
List of species that were sampled and locations of sampling sites. |
Coral Microbial Relationships |
species |
Sites and symbionts |
Sites and symbionts |
St. John LTREB, RUI-LTREB |
Host |
Size and species of focal basslets |
Hunting patterns by predator species. |
BiodiversityLossEffects_lionfish |
predator_species, bass_species |
Snail larvae in turbulence and waves |
|
Turbulence and Larval Behavior |
species |
Spawning Trial |
Spawning Trial |
HYPOA |
Species |
Spawning Trial - Egg Production |
Egg Production |
HYPOA |
Species |
Species Code Key |
Species code key for M. Carr and T. Tinker Kelp Forest Resilience project. |
Kelp_Forest_Resilience |
classcode, species |
Species composition with CTD data: 5 daytrips |
Species composition with CTD data: 5 daytrips |
CopesPopDynHypoZone |
Species |
Species key |
Species key for individuals surveyed in studies conducted by M. Hixon, C. Benkwitt, and T. Kindinger |
BiodiversityLossEffects_lionfish |
SPECIES_CODE |
Species key for Hixon and Kindinger datasets |
Species key for individuals identified in all T. Kindinger datasets. |
BiodiversityLossEffects_lionfish |
species_code, scientific_name |
species list |
Names, codes, and characteristics of species observed during reef surveys in the Bahamas. |
Lionfish Invasion |
species, species_new, species_substitute |
Species list |
List of coral species with codes: Guam 2014 |
Reef Resilience in Guam |
species |
Species richness |
Species richness in MPAs |
Killer Seaweeds |
species |
spp_barcodes |
species barcodes and other genetic data |
CMarZ_2004-2010 |
Species |
St John Octocoral Abundances 2019 |
Octocoral colony heights measured during transect surveys at four sites on the south shore of St. John, US Virgin Islands in June-October 2019 |
Octocoral Community Dynamics |
Genus_Species |
Stable Isotope 13C and 15N |
Stable Isotope 13C and 15N |
Sponge Holobiont DOM |
Species |
stony coral array metadata |
Tile array metadata and fish identified from photos |
Killer Seaweeds |
species, fish |
stony coral distribution - 2m circles |
Colony sizes and distances from each other in 2-meter circles, Fiji 2013 |
Killer Seaweeds |
species_focal, species_counted |
stony coral distribution - 64 m2 grids |
Spatial distribution of P. damicornis and S. hystrix, Fiji I., 2013 |
Killer Seaweeds |
species_or_substrate |
stony coral fragment survival expts. |
stoney coral fragment survival experiment, Fiji 2013 |
Killer Seaweeds |
species |
stony coral replacement tiles |
Stoney coral survival experiments on replacement tiles |
Killer Seaweeds |
species |
Survival and size |
Survival, length, and growth responses of M. menidia offspring from different females exposed to contrasting CO2 environments. |
HYPOA |
Species |
Suspension feeder PIV data |
Ciona intestinalis, Mercenaria mercenaria and Mya arenaria velocity fields from PIV experiments |
Inhalant flows |
species |
Suspension feeder size data |
Ciona intestinalis, Mercenaria mercenaria and Mya arenaria size data from specimens used in PIV experiments |
Inhalant flows |
species |
Swimming Endurance |
Ontogeny of swimming endurance of larval Amphiprion percula, Elacatinus lori, and Elacatinus colini from Belize in 2015. |
Elacatinus Dispersal II |
species |
switch competition |
Compete pCO2 conditioned clones in artificial communities |
Plankton acclimation |
species |
Switch experiment E2 |
Switch experiment E2 |
HYPOA |
Species |
Symbiodiniaceae communities in corals with ITS-2 rDNA amplicon sequencing |
|
Moorea Virus Project |
Host_Species |
Symbiodinium Fv/Fm over a temperature gradient |
Symbiodinium Fv/Fm over a temperature gradient |
Varadero Reef, GCMB |
Species |
Symbiont community structure in Orbicella faveolata |
Symbiont community structure in Orbicella faveolata |
Symbiont Shifts on Reefs |
species |
Temperature dependent changes in biovolume |
Temperature dependent changes in biovolume of three herbivorous protists |
Planktonic Herbivore Temp Dependence |
Species |
Temperature-dependence of juvenile Black sea bass growth and lipid accumulation - Experiment 2 |
Temperature-dependence of juvenile Black sea bass growth and lipid accumulation - Experiment 2 |
HYPOA |
Species |
Temporal CO2-sensitivity in fish |
Temporal CO2-sensitivity in three estuarine fish species. |
OA Fish |
species |
Temporal CO2-sensitivity in Menidia menidia |
Temporal CO2-sensitivity in Menidia menidia. |
OA Fish |
species |
TEN Biomass Weights Spring 2018 |
TEN Biomass Weights Spring 2018 |
Tropicalization Seagrass Beds |
otherveg2_spp, otherveg3_spp, otherveg4_spp, otherveg5_spp, otherveg6_spp, otherveg1_spp |
Thalassinid hydraulics and oxygen dynamics |
Images, porewater pressure, O2 data from lab expts of Thalassinids in diff sediment types. |
Infaunal Hydraulics |
species |
Thalassiosira Fe and light limitation - ENA accessions |
ENA accessions for transcriptomes of T. oceanica and T. weissflogii grown in varied Fe and light |
GeTFeHvCOdia |
species |
Thalassiosira Fe and light limitation - NCBI and iMicrobe accessions |
NCBI and iMicrobe accessions for transcriptomes of T. oceanica and T. weissflogii grown in varied Fe and light |
GeTFeHvCOdia |
species |
Thaumarchaea transcriptomes |
Thaumarchaea transcriptomes |
AmoA Archaea |
Organism |
Thermal growth rates |
PFT Thermal Response - Thermal growth rates |
Phytoplankton Community Responses |
species, name |
Thermal Stress Experiment: Color Score Physiology |
Thermal Stress Experiment: Color Score Physiology |
Holobiont Integration |
Species |
Thermophile growth |
NH4Cl effect on growth, yield, production of thermophyles, Table 3 from Topcuoglu et al (2016) |
NeMO2015 |
species |
Time and temperature dependent growth |
Time and temperature dependent growth rate of three herbivorous protists |
Planktonic Herbivore Temp Dependence |
Species |
Tissue data from Keister et al. 2023 |
Palau coral comparative analysis thermal tolerance physiology |
Thermally tolerant coral |
Species |
Tissue Mortality Month 4 and 16 |
Percent tissue mortality of corals in experimental plots at month 4 and 16 on a fringing reef in Fiji. |
Killer Seaweeds |
Species |
Tracer data |
Palau coral nutrient transfer tracer experiments |
Thermally tolerant coral |
Species, Symbiont |
trace_metal_microarray |
Trace metal controlled diel microarray experiments with diatoms. |
Pennate Diatom Genomics |
species |
Transcriptome statistics |
Transcriptome statistics from samples obtained on LMG1411. |
Polar_Transcriptomes |
species |
Transcriptomic response of Emiliania huxleyi to HHQ |
Transcriptomic response of Emiliania huxleyi to HHQ |
HHQSignals |
organism, tax_ID |
Transmission and Lesion Data |
Transmission and Lesion Data |
Multi-Species Coral Disease |
Species |
trawl catch - CCS |
Trawl catches, abundance, biomass |
NEP |
genus_species |
Trawl survey: catch composition |
Trawl catch composition |
PelagicHypoxia |
Species_name |
Trawl survey: fish and jellyfish sample data |
Fish and jellyfish sample data |
PelagicHypoxia |
Species |
Trawl survey: species list |
Species list |
PelagicHypoxia |
ScientificName |
trawl_catch_fishlen - CGOA |
Fish lengths from CGOA trawl data |
NEP |
species |
Tubeworms |
|
Costa Rica Seeps |
Species |
Unhatched stages E1 |
Unhatched stages E1 |
HYPOA |
Species |
Urchin Fertilization Studies |
Urchin Fertilization Studies |
SeapHOx |
Species |
urchin grazing |
Percent algal substrate grazed by sea urchins in trophic cascade experiment in Galápagos Islands |
GMR Trophic Cascades |
species |
Urchin Respiration Rates |
Pencil urchin respiration rates |
Temperature and Herbivory |
Species, Species_Fullname |
Urchins |
Sea urchin data |
Coral Reef Adjustment |
species |
V4 amplicon sequencing of coral tissue |
Accession numbers and locations of species analyzed. |
Coral Microbial Relationships |
coral_species |
Vent Parasite Dissection Data |
Species dissection rom the 9°50’N deep-sea hydrothermal vent field. |
EPR Functional Diversity |
HOST_SPECIES, PARASITE_SPECIES_NAME |
Viral Consortia in Stony Corals |
Viral Consortia in Stony Corals |
Multi-Species Coral Disease |
Coral_Species |
Vouchered specimens |
Vouchered specimens |
Costa Rica Seeps |
species |
Warm Core Rings Stratified Euphausiid Abundance and Zooplankton Biomass |
Gulf Stream Warm-Core Rings stratified euphausiid abund and zoop biomass- 1981-86 |
NAtlDarkData |
species |
Water temperature at coral colonies |
Water temperature at coral colony locations |
Bleaching American Samoa |
species |
Water temperature for Palau corals |
|
Heat Tolerant Corals |
Species |
whales ship-based sightings |
Marine mammal sightings and hours at sea during vessel-based habitat sampling cruises of Cape Cod Bay and adjacent waters, 2002 |
NEC-CoopRes |
species |
Whelan_2014_T3: toxin genes identified in Nemertean species |
Toxin genes identified in Nemertean species |
Antarctic Inverts |
species |
Whelk size distributions: counts |
Whelk counts from 4 sites relative to tidal elevation from coastal Oregon, 2014-2015 |
Sea star wasting |
N_can, N_ost |
Whelk size distributions: individuals |
Whelk sizes measured from 4 sites relative to tidal elevation from coastal Oregon, 2014-2015 |
Sea star wasting |
species |
White Plague Disease Transmission Phenotypic Response |
|
Coral Immune Traits |
Species |
WS1209 strains |
Microbial culture collection, strain IDs, locations and depth from cruise WB1209 |
CEMSB |
species_strain |
Zooplankton - Copepod Egg Production |
Zooplankton - Copepod Egg Production |
RISE |
Species |
Zooplankton - Euphausiid Egg Production |
Zooplankton - Euphausiid Egg Production |
RISE |
Species |
Zooplankton - Euphausiid Growth Rates |
Zooplankton - Euphausiid Growth Rates |
RISE |
Species |
Zooplankton Densities |
Zooplankton densities by species and life stage in a seasonally hypoxic fjord. |
PelagicHypoxia |
species |
Zooplankton from hypoxic waters of Chesapeake Bay |
Zooplankton - esp. copepods - from hypoxic waters of the Chesapeake Bay |
DeZoZoo |
species |
Zooplankton metabolic traits |
Respirometry data for pelagic crustaceans, cephalopods, and fish |
Metabolic Index |
AphiaID_accepted, ScientificName_accepted |
Zooplankton/phytoplankton CSIA-AA |
15N AA from phytoplankton, microzooplankton and Calanus pacificus |
CSIA-AA Mesozooplankton TP |
Organism |
zoop_ANT-XXIV_1 |
Zooplankton identified on Polarstern cruise ANT-XXIV_1 in the Eastern Atlantic |
CMarZ_2004-2010 |
species |
zoop_RHB0603 |
Zooplankton species identified during RHB0603 in the Sargasso Sea |
CMarZ_2004-2010 |
species |
Zoo_DMC_2007-2011 |
Abundance and composition of the zooplankton community at the Darling Marine Center Monitoring stations. |
DMC |
species_stage |
Zoo_DMC_2007-2011_Columns |
Abundance and composition of the zooplankton community at the Darling Marine Center Monitoring stations - Columnar view |
DMC |
species |