Contributors | Affiliation | Role |
---|---|---|
Davis, Curtiss | U.S. Naval Research Laboratory (NRL) | Principal Investigator |
Trees, Charles C. | San Diego State University (SDSU) | Principal Investigator |
Chandler, Cynthia L. | Woods Hole Oceanographic Institution (WHOI BCO-DMO) | BCO-DMO Data Manager |
Bio Optical Profiler Data
See Platform deployments for cruise specific documentation
File |
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optics_TT007.csv (Comma Separated Values (.csv), 2.74 MB) MD5:22142af69d81d8af6ef929e845687444 CRUISE: EqPac Spring Survey 1992 STATION 1 DOWNCAST 4 Feb 1992, 141000 GMT Lat 12.000, Lon -140.000 Zmax 196.80 |
optics_TT008.csv (Comma Separated Values (.csv), 1.83 MB) MD5:fd0e5c88cd53955459a9244833b06bd6 |
optics_TT011.csv (Comma Separated Values (.csv), 2.55 MB) MD5:da4f3487f516cdf5f8a55350aa2383b3 CRUISE: EqPac Fall Survey 1992 STATION 1 DOWNCAST 10 Aug 1992, 222200 GMT Lat 12.003, Lon -140.026 Zmax 186.68 |
optics_TT012.csv (Comma Separated Values (.csv), 1.86 MB) MD5:3acc1ccae45fea61038de414b654b704 |
Parameter | Description | Units |
event | event/operation number from event log | |
sta | station number fro event log | |
cast | optical profile cast number | |
cast_type | either upcast or downcast | |
lat | latitude, negative = south | decimal degrees |
lon | longitude, negative = west | decimal degrees |
depth | depth_of_observation | meters |
Es_n456 | spectral irradiance above sea su wave length of 456nm | uW/cm^2nm^-1*10^-3 |
Es_n488 | spectral irradiance above sea su wave length of 488nm | uW/cm^2nm^-1*10^-3 |
Es_n532 | spectral irradiance above sea su wave length of 532nm | uW/cm^2nm^-1*10^-3 |
Es_n670 | spectral irradiance above sea su wave length of 670nm | uW/cm^2nm^-1*10^-3 |
Kd_452 | diffuse attenuation coefficient for Ed 452 | m^-1*10^-4 |
Ed_452 | downwelled irradiance at wave length of 452 | uW/cm^2nm^-1*10^-4 |
Kd_440 | diffuse attenuation coefficient for Ed 440 | m^-1*10^-4 |
Ed_440 | downwelled irradiance at wave length of 440 | uW/cm^2nm^-1*10^-4 |
Kd_486 | diffuse attenuation coefficient for Ed 486 | m^-1*10^-4 |
Ed_486 | downwelled irradiance at wave length of 486 | uW/cm^2nm^-1*10^-4 |
Kd_519 | diffuse attenuation coefficient for Ed 519 | m^-1*10^-4 |
Ed_519 | downwelled irradiance at wave length of 519 | uW/cm^2nm^-1*10^-4 |
Kd_530 | diffuse attenuation coefficient for Ed 530 | m^-1*10^-4 |
Ed_530 | downwelled irradiance at wave length of 530 | uW/cm^2nm^-1*10^-4 |
Kd_548 | diffuse attenuation coefficient for Ed 548 | m^-1*10^-4 |
Ed_548 | downwelled irradiance at wave length of 548 | uW/cm^2nm^-1*10^-4 |
Kd_589 | diffuse attenuation coefficient for Ed 589 | m^-1*10^-4 |
Ed_589 | downwelled irradiance at wave length of 589 | uW/cm^2nm^-1*10^-4 |
Kd_632 | diffuse attenuation coefficient for Ed 632 | m^-1*10^-4 |
Ed_632 | downwelled irradiance at wave length of 632 | uW/cm^2nm^-1*10^-4 |
Kd_655 | diffuse attenuation coefficient for Ed 655 | m^-1*10^-4 |
Ed_655 | downwelled irradiance at wave length of 655 | uW/cm^2nm^-1*10^-4 |
Kd_670 | diffuse attenuation coefficient for Ed 670 | m^-1*10^-4 |
Ed_670 | downwelled irradiance at wave length of 670 | uW/cm^2nm^-1*10^-4 |
Kd_696 | diffuse attenuation coefficient for Ed 696 | m^-1*10^-4 |
Ed_696 | downwelled irradiance at wave length of 696 | uW/cm^2nm^-1*10^-4 |
K_par | diffuse attenuation coefficient for E par | m^-1*10^-4 |
E_par | underwater photosynthetically available radiation | uE/m^2/sec*10^-4 |
Ku_439 | diffuse attenuation coefficient for Eu 439 | m^-1*10^-4 |
Eu_439 | upwelled irradiance at wave length of 439 | uW/cm^2nm^-1*10^-4 |
Ku_453 | diffuse attenuation coefficient for Eu 453 | m^-1*10^-4 |
Eu_453 | upwelled irradiance at wave length of 453 | uW/cm^2nm^-1*10^-4 |
Ku_486 | diffuse attenuation coefficient for Eu 486 | m^-1*10^-4 |
Eu_486 | upwelled irradiance at wave length of 486 | uW/cm^2nm^-1*10^-4 |
Ku_529 | diffuse attenuation coefficient for Eu 529 | um^-1*10^-4 |
Eu_529 | upwelled irradiance at wave length of 529 | uW/cm^2nm^-1*10^-4 |
Ku_549 | diffuse attenuation coefficient for Eu 549 | m^-1*10^-4 |
Eu_549 | upwelled irradiance at wave length of 549 | uW/cm^2nm^-1*10^-4 |
Ku_589 | diffuse attenuation coefficient for Eu 589 | m^-1*10^-4 |
Eu_589 | upwelled irradiance at wave length of 589 | uW/cm^2nm^-1*10^-4 |
Ku_632 | diffuse attenuation coefficient for Eu 632 | m^-1*10^-4 |
Eu_632 | upwelled irradiance at wave length of 632 | uW/cm^2nm^-1*10^-4 |
Ku_670 | diffuse attenuation coefficient for | Eu 670 |
Eu_670 | upwelled irradiance at wave length of 670 | uW/cm^2nm^-1*10^-4 |
Kl_442 | diffuse attenuation coefficient for Lu 442 | m^-1*10^-4 |
Lu_442 | upwelled radiance at wave length of 442 | uW/cm^2nm^-1sr^-1*10^-5 |
Kl_456 | diffuse attenuation coefficient for Lu 456 | m^-1*10^-4 |
Lu_456 | upwelled radiance at wave length of 456 | uW/cm^2nm^-1sr^-1*10^-5 |
Kl_489 | diffuse attenuation coefficient for Lu 489 | m^-1*10^-4 |
Lu_489 | upwelled radiance at wave length of 489 | uW/cm^2nm^-1sr^-1*10^-5 |
Kl_531 | diffuse attenuation coefficient for Lu 531 | m^-1*10^-4 |
Lu_531 | upwelled radiance at wave length of 531 | uW/cm^2nm^-1sr^-1*10^-5 |
Kl_550 | diffuse attenuation coefficient for Lu 550 | m^-1*10^-4 |
Lu_550 | upwelled radiance at wave length of 550 | uW/cm^2nm^-1sr^-1*10^-5 |
Kl_590 | diffuse attenuation coefficient for Lu 590 | m^-1*10^-4 |
Lu_590 | upwelled radiance at wave length of 590 | uW/cm^2nm^-1sr^-1*10^-5 |
Kl_711 | diffuse attenuation coefficient for Lu 711 | m^-1*10^-4 |
Lu_711 | upwelled radiance at wave length of 711 | uW/cm^2nm^-1sr^-1*10^-5 |
temp | CTD derived water temperature | millidegrees C |
beam | particle beam attenuation coefficient | meters |
fluor | chlorophyll-a fluorescence | millivolts |
year | year as YY | |
mon | month as MM | |
day | day as DD | |
time | time in local hours and minutes | |
comment | sky conditions etc. | |
pts_per_meter | number of original points per one meter bin | count |
tilt | instrument tilt | degrees range -45 to 45 |
roll | instrument roll | degrees range -45 to 45 |
sal | CTD salinity calculated from conductivity | PPT |
cond | CTD conductivity | |
sigma | calculated density | |
paruw | downwelling scalar PAR at depth | E17 quanta/sec/cm^2 |
ed_410 | downwelling spectral irradiance at depth | uW/cm^2/nm |
ed_441 | downwelling spectral irradiance at depth | uW/cm^2/nm |
ed_488 | downwelling spectral irradiance at depth | uW/cm^2/nm |
ed_520 | downwelling spectral irradiance at depth | uW/cm^2/nm |
ed_550 | downwelling spectral irradiance at depth | uW/cm^2/nm |
ed_560 | downwelling spectral irradiance at depth | uW/cm^2/nm |
ed_633 | downwelling spectral irradiance at depth | uW/cm^2/nm |
ed_656 | downwelling spectral irradiance at depth | uW/cm^2/nm |
ed_671 | downwelling spectral irradiance at depth | uW/cm^2/nm |
ed_683 | downwelling spectral irradiance at depth | uW/cm^2/nm |
ed_694 | downwelling spectral irradiance at depth | uW/cm^2/nm |
ed_710 | downwelling spectral irradiance at depth | uW/cm^2/nm |
eu_410 | upwelling spectral irradiance at depth | uW/cm^2/nm |
eu_441 | upwelling spectral irradiance at depth | uW/cm^2/nm |
eu_488 | upwelling spectral irradiance at depth | uW/cm^2/nm |
eu_520 | upwelling spectral irradiance at depth | uW/cm^2/nm |
eu_550 | upwelling spectral irradiance at depth | uW/cm^2/nm |
eu_671 | upwelling spectral irradiance at depth | uW/cm^2/nm |
eu_694 | upwelling spectral irradiance at depth | uW/cm^2/nm |
lu_410 | upwelling spectral radiance at depth | uW/cm^2/nm/str |
lu_441 | upwelling spectral radiance at depth | uW/cm^2/nm/str |
lu_488 | upwelling spectral radiance at depth | uW/cm^2/nm/str |
lu_520 | upwelling spectral radiance at depth | uW/cm^2/nm/str |
lu_633 | upwelling spectral radiance at depth | uW/cm^2/nm/str |
lu_656 | upwelling spectral radiance at depth | uW/cm^2/nm/str |
lu_683 | upwelling spectral radiance at depth | uW/cm^2/nm/str |
e_410 | spectral irradiance above sea surface | uW/cm^2/nm |
e_520 | spectral irradiance above sea surface | uW/cm^2/nm |
e_589 | spectral irradiance above sea surface | uW/cm^2/nm |
e_683 | spectral irradiance above sea surface | uW/cm^2/nm |
Kd_518 | diffuse attenuation coefficient for Ed_519 | m^-1*10^-4 |
Ed_518 | downwelled irradiance at wave length of 519 | uW/cm^2nm^-1*10^-4 |
Kd_669 | diffuse attenuation coefficient for Ed_670 | m^-1*10^-4 |
Ed_669 | downwelled irradiance at wave length of 670 | uW/cm^2nm^-1*10^-4 |
Kl_455 | diffuse attenuation coefficient for Lu_456 | m^-1*10^-4 |
Lu_455 | upwelled radiance at wave length of 456 | uW/cm^2nm^-1sr^-1*10^-5 |
Kl_591 | diffuse attenuation coefficient for Lu_590 | m^-1*10^-4 |
Lu_591 | upwelled radiance at wave length of 590 | uW/cm^2nm^-1sr^-1*10^-5 |
Kl_685 | diffuse attenuation coefficient for Lu_685 | m^-1*10^-4 |
Lu_685 | upwelled radiance at wave length of 685 | uW/cm^2nm^-1sr^-1*10^-5 |
Dataset-specific Instrument Name | Bio-Optical Profiling System |
Generic Instrument Name | Bio-Optical Profiling System |
Generic Instrument Description | Bio-Optical Profiling System (BOPS) is an updated version of the BOPS originally developed by Smith et al. (1984) and is used to collect optical data. The heart of the BOPS is a Biospherical instruments MER-1048 Spectroradiometer which measures up and downwelling spectral irradiance and upwelling spectral radiance. The MER-1048 also has sensors for Photosynthetically Available Radiation (PAR), depth, tilt and roll. In addition, temperature and conductivity are measured with a Sea-Bird CTD, chlorophyll fluorescence is measured with a Sea Tech fluorometer and beam transmission with a Sea Tech 25-cm transmissometer. The Mer-1048 acquires all the data 16 times a second, averages it to four records a second and sends it up the cable to a deck box and a Compaq-286 computer which stores the data on the hard disk. Additionally, a deck cell measures the downwelling surface irradiance in four spectral channels. Also surface PAR is measured continuously using a Biospherical Instruments QSR-240 Integrating PAR sensor. The profile data is commonly filtered to remove obvious data spikes and then binned into one-meter averages.
Raymond C. Smith, Charles R. Booth, and Jeffrey L. Star, "Oceanographic biooptical profiling system," Appl. Opt. 23, 2791-2797 (1984). |
Website | |
Platform | R/V Thomas G. Thompson |
Start Date | 1992-01-30 |
End Date | 1992-03-13 |
Description | Purpose: Spring Survey Cruise; 12°N-12°S at 140°W
TT007 was one of five cruises conducted in 1992 in support of the U.S. Equatorial Pacific (EqPac) Process Study. The five EqPac cruises aboard R/V Thomas G. Thompson included two repeat meridional sections (12°N - 12°S), 2 equatorial surveys, and a benthic survey (all at 140° W). The scientific objectives of this study were to observe the processes in the Equatorial Pacific controlling the fluxes of carbon and related elements between the atmosphere, euphotic zone, and deep ocean. As luck would have it, the survey window coincided with an El Nino event. A bonus for the research team. Methods & Sampling PI: Chuck Trees of: San Diego State University dataset: Bio Optical Profiler Data dates: February 04, 1992 to March 08, 1992 location: N: 12.0147 S: -12.0293 W: -140.434 E: -134.9978 project/cruise: EQPAC/TT007 - Spring Survey ship: Thomas Thompson note: Surface irradiance (Es_n) wave lengths are only relative values and should not be used as absolute values. These data are used for internal processing of the radiometric data. EqPac Protocol 24 |
Website | |
Platform | R/V Thomas G. Thompson |
Start Date | 1992-03-19 |
End Date | 1992-04-15 |
Description | Purpose: Spring Time Series; Equator, 140°W
TT008 was one of five cruises conducted in 1992 in support of the U.S. Equatorial Pacific (EqPac) Process Study. The five EqPac cruises aboard R/V Thomas G. Thompson included two repeat meridional sections (12°N - 12°S), 2 equatorial surveys, and a benthic survey (all at 140° W). The scientific objectives of this study were to observe the processes in the Equatorial Pacific controlling the fluxes of carbon and related elements between the atmosphere, euphotic zone, and deep ocean. As luck would have it, the survey window coincided with an El Nino event. A bonus for the research team. Methods & Sampling PI: Curt Davis of: Naval Research Laboratory dataset: Bio-Optical Profiler Data dates: March 25, 1992 to April 14, 1992 location: N: 9.0012 S: -0.0365 W: -140.029 E: -139.859 project/cruise: EQPAC/TT008 - Spring time Series ship: Thomas Thompson PI-Notes EqPac Protocol 24 |
Website | |
Platform | R/V Thomas G. Thompson |
Start Date | 1992-08-05 |
End Date | 1992-09-18 |
Description | Purpose: Fall Survey; 12°N-12°S at 140°W
TT011 was one of five cruises conducted in 1992 in support of the U.S. Equatorial Pacific (EqPac) Process Study. The five EqPac cruises aboard R/V Thomas G. Thompson included two repeat meridional sections (12°N - 12°S), 2 equatorial surveys, and a benthic survey (all at 140° W). The scientific objectives of this study were to observe the processes in the Equatorial Pacific controlling the fluxes of carbon and related elements between the atmosphere, euphotic zone, and deep ocean. As luck would have it, the survey window coincided with an El Nino event. A bonus for the research team. Methods & Sampling PI: Chuck Trees of: San Diego State University dataset: Bio-Optical Profiler Data dates: August 10, 1992 to September 13, 1992 location: N: 12.0033 S: -11.9217 W: -140.84 E: -134.9467 project/cruise: EQPAC/TT011 - Fall Survey ship: Thomas Thompson PI-Notes: Surface irradiance (Es_n) wave lengths are only relative values and should not be used as absolute values. These data are used for internal processing of the radiometric data. EqPac Protocol 24 |
Website | |
Platform | R/V Thomas G. Thompson |
Start Date | 1992-09-24 |
End Date | 1992-10-21 |
Description | Purpose: Fall Time Series; Equator, 140°W
TT012 was one of five cruises conducted in 1992 in support of the U.S. Equatorial Pacific (EqPac) Process Study. The five EqPac cruises aboard R/V Thomas G. Thompson included two repeat meridional sections (12°N - 12°S), 2 equatorial surveys, and a benthic survey (all at 140° W). The scientific objectives of this study were to observe the processes in the Equatorial Pacific controlling the fluxes of carbon and related elements between the atmosphere, euphotic zone, and deep ocean. As luck would have it, the survey window coincided with an El Nino event. A bonus for the research team. Methods & Sampling PI: Curt Davis of: Naval Research Laboratory dataset: Bio-Optical Profiler Data dates: September 26, 1992 to October 21, 1992 location: N: 0.0645 S: -11.9958 W: -145.3995 E: -139.8992 project/cruise: EQPAC/TT012 - Fall Time Series ship: Thomas Thompson PI-Notes EqPac Protocol 24 |
The U.S. EqPac process study consisted of repeat meridional sections (12°N -12°S) across the equator in the central and eastern equatorial Pacific from 95°W to 170°W during 1992. The major scientific program was focused at 140° W consisting of two meridional surveys, two equatorial surveys, and a benthic survey aboard the R/V Thomas Thompson. Long-term deployments of current meter and sediment trap arrays augmented the survey cruises. NOAA conducted boreal spring and fall sections east and west of 140°W from the R/V Baldridge and R/V Discoverer. Meteorological and sea surface observations were obtained from NOAA's in place TOGA-TAO buoy network.
The scientific objectives of this study were to determine the fluxes of carbon and related elements, and the processes controlling these fluxes between the Equatorial Pacific euphotic zone and the atmosphere and deep ocean. A broad overview of the program at the 140°W site is given by Murray et al. (Oceanography, 5: 134-142, 1992). A full description of the Equatorial Pacific Process Study, including the international context and the scientific results, appears in a series of Deep-Sea Research Part II special volumes:
Topical Studies in Oceanography, A U.S. JGOFS Process Study in the Equatorial Pacific (1995), Deep-Sea Research Part II, Volume 42, No. 2/3.
Topical Studies in Oceanography, A U.S. JGOFS Process Study in the Equatorial Pacific. Part 2 (1996), Deep-Sea Research Part II, Volume 43, No. 4/6.
Topical Studies in Oceanography, A U.S. JGOFS Process Study in the Equatorial Pacific (1997), Deep-Sea Research Part II, Volume 44, No. 9/10.
Topical Studies in Oceanography, The Equatorial Pacific JGOFS Synthesis (2002), Deep-Sea Research Part II, Volume 49, Nos. 13/14.
The United States Joint Global Ocean Flux Study was a national component of international JGOFS and an integral part of global climate change research.
The U.S. launched the Joint Global Ocean Flux Study (JGOFS) in the late 1980s to study the ocean carbon cycle. An ambitious goal was set to understand the controls on the concentrations and fluxes of carbon and associated nutrients in the ocean. A new field of ocean biogeochemistry emerged with an emphasis on quality measurements of carbon system parameters and interdisciplinary field studies of the biological, chemical and physical process which control the ocean carbon cycle. As we studied ocean biogeochemistry, we learned that our simple views of carbon uptake and transport were severely limited, and a new "wave" of ocean science was born. U.S. JGOFS has been supported primarily by the U.S. National Science Foundation in collaboration with the National Oceanic and Atmospheric Administration, the National Aeronautics and Space Administration, the Department of Energy and the Office of Naval Research. U.S. JGOFS, ended in 2005 with the conclusion of the Synthesis and Modeling Project (SMP).