Sperm whale skin bulk C and N isotopes from the California Current System, 1972 to 2005

Website: https://www.bco-dmo.org/dataset/653047
Data Type: Other Field Results
Version: 1
Version Date: 2016-08-02

Project
» A novel approach for evaluating temporal and spatial changes in trophic structure of the mesopelagic eastern Pacific (Sperm Whale SI Ratios)
ContributorsAffiliationRole
Koch, Paul L.University of California-Santa Cruz (UCSC)Principal Investigator
McCarthy, Matthew D.University of California-Santa Cruz (UCSC)Co-Principal Investigator
Ruiz-Cooley, Rocio I.University of California-Santa Cruz (UCSC)Student
Copley, NancyWoods Hole Oceanographic Institution (WHOI BCO-DMO)BCO-DMO Data Manager

Abstract
This dataset includes sperm whale skin bulk C and N isotopes. A total of 18 skin samples were analyzed. The sperm whale skin tissue came from the California Current System, 1972 to 2005.


Coverage

Spatial Extent: N:46.97 E:-117.35 S:32.47 W:-129.82
Temporal Extent: 1972-12 - 2005-07

Methods & Sampling

Materials and methods for analysis are described in detail in the Ruiz_Cooly et al (2014). Bulk isotope values were analyzed by continuous flow isotope ratio mass spectrometry (IRMS; Thermo Finnigan) and standardized relative to Vienna-Pee Belemnite (V-PDB) for carbon and atmospheric N2 for nitrogen. Results are expressed in part per thousand (‰) and standard notation: dHX= [(Rsample/Rstandard)] x 1000, where H is the mass number of the heavy isotope, X is either C or N, and Rsample and Rstandard are the ratio of 13C/12C or 15N/14N in the sample and standard, respectively.


Data Processing Description

Regression analyses were conducted to evaluate linear relationship between time and each isotopic tracer.

BCO-DMO Processing:
- added conventional header with dataset name, PI name, version date, reference information
- renamed parameters to BCO-DMO standard


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Data Files

File
skin_bulk.csv
(Comma Separated Values (.csv), 852 bytes)
MD5:39cca7b13add7d133031788a89288aed
Primary data file for dataset ID 653047

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Related Publications

Ruiz-Cooley, R. I., Koch, P. L., Fiedler, P. C., & McCarthy, M. D. (2014). Carbon and Nitrogen Isotopes from Top Predator Amino Acids Reveal Rapidly Shifting Ocean Biochemistry in the Outer California Current. PLoS ONE, 9(10), e110355. doi:10.1371/journal.pone.0110355
Results

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Related Datasets

IsRelatedTo
Koch, P. L., McCarthy, M. D. (2021) Compound-specific carbon isotopes from sperm whale skin tissue from the UC-Santa Cruz labs of P. Koch and M. McCarthy (Sperm Whale SI Ratios project). Biological and Chemical Oceanography Data Management Office (BCO-DMO). (Version 1) Version Date 2016-08-02 doi:10.26008/1912/bco-dmo.653106.1 [view at BCO-DMO]
Koch, P. L., McCarthy, M. D. (2021) Compound-specific nitrogen isotopes from sperm whale skin tissue from the UC-Santa Cruz labs of P. Koch and M. McCarthy (Sperm Whale SI Ratios project). Biological and Chemical Oceanography Data Management Office (BCO-DMO). (Version 1) Version Date 2016-08-02 doi:10.26008/1912/bco-dmo.653061.1 [view at BCO-DMO]
Koch, P. L., McCarthy, M. D. (2021) Sperm whale skin tissue samples analyzed for C and N at UC-Santa Cruz: date and location of collection from the California Current System. Biological and Chemical Oceanography Data Management Office (BCO-DMO). (Version 1) Version Date 2016-08-02 doi:10.26008/1912/bco-dmo.653118.1 [view at BCO-DMO]

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Parameters

ParameterDescriptionUnits
SWFSC_id

identification number assigned to sample at Southwest Fisheries Science Center

unitless
UCSC_id

identification number assigned to sample at UC Santa Cruz

unitless
date_collected

date sample was collected; format: yyyy-mm

year; month
lat

latitude; north is positive

decimal degrees
lon

longitude; east is positive

decimal degrees
d13C

delta 13 C. Isotope values are reported in conventional d-notation relative to the international standard V-PDB.

parts per thousand
d15N

delta 15 N. Isotope values are reported in conventional d-notation relative to the international standard atmospheric N2.

parts per thousand


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Instruments

Dataset-specific Instrument Name
Generic Instrument Name
Isotope-ratio Mass Spectrometer
Dataset-specific Description
Thermo Finnigan DeltaPlus XP isotope ratio mass spectrometer (Thermo Scientific, Bremen, Germany)
Generic Instrument Description
The Isotope-ratio Mass Spectrometer is a particular type of mass spectrometer used to measure the relative abundance of isotopes in a given sample (e.g. VG Prism II Isotope Ratio Mass-Spectrometer).


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Deployments

lab_UCSC_Koch

Website
Platform
UCSC
Start Date
2012-03-01
End Date
2016-03-01
Description
whale isoptope studies


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Project Information

A novel approach for evaluating temporal and spatial changes in trophic structure of the mesopelagic eastern Pacific (Sperm Whale SI Ratios)

Coverage: California Current, Eastern Tropical Pacific, and the Peru-Humboldt Current


Description from NSF award abstract:
Anthropogenic and natural climatic perturbations drive changes in population dynamics of species, the structure and function of food webs, and biogeochemical processes. The PIs propose a comparative analysis of three major ecosystems to investigate temporal change in the structure of mesopelagic food webs.

The PIs will investigate temporal changes in the structure of mesopelagic food webs in three major ecosystems: the California Current, Eastern Tropical Pacific, and the Peru-Humboldt Current over the past 50 years using a globally distributed apex predator as an indicator species. The predator is the sperm whale, Physeter macrocephalus, and the PIs will use stable isotope ratios of carbon and nitrogen as indicators of habitat and diet. Isotope values from bulk tissues of teeth and skin (C and N) as well as specific amino acids (N) will be used to address two primary objectives: (a) examine temporal patterns in the trophic position of sperm whales (as an indicator of changes in mesopelagic trophic structure) and baseline isotopic values (as indicators of nutrient cycling); and (b) use isotopic values, which vary among systems, to define the population structure of sperm whales from past and present times, and connectivity among populations.

This project will be conducted by researchers from academia and NOAA/NMFS with expertise in stable isotope analysis, trophic ecology, and ecosystem-based management of protected species. As such, it represents an opportunity for collaboration between scientists with complementary skills and from diverse institutions to compare structure and function of ecosystems across the eastern Pacific. Moreover, it represents a collaboration between academia and a federal agency with research and management responsibilities. The project will support a postdoctoral scholar (Iliana Ruiz-Cooley), a Ph.D. student, and undergraduate students to enhance their career and collaborative opportunities. The PIs anticipate that the results of their study will provide unique data to evaluate the effects of perturbations within and among mesopelagic ecosystems. This information may allow the scientific community to relate trends in climate to changes in trophic position of top predators and nutrient cycling, allowing more robust understanding of possible responses to future warming. Finally, as the first systematic applications of compound-specific stable isotope analysis to marine mammals, the project should be highly instructive for future evaluations of the feeding ecology, population structure and dynamics of endangered marine mammals. As such, this novel approach and unique historic perspective will be directly applicable for stock assessment and management.



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Funding

Funding SourceAward
NSF Division of Ocean Sciences (NSF OCE)

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