Contributors | Affiliation | Role |
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Barott, Katie | University of Pennsylvania (Penn) | Principal Investigator |
Putnam, Hollie | University of Rhode Island (URI) | Principal Investigator |
Brown, Kristen | University of Pennsylvania (Penn) | Co-Principal Investigator |
York, Amber D. | Woods Hole Oceanographic Institution (WHOI BCO-DMO) | BCO-DMO Data Manager |
This dataset and other data from this study will be published in the results paper "Divergent bleaching and recovery trajectories in reef-building corals following a decade of successive marine heatwaves." (see pre-print Brown, et al. (2023), doi: 10.1101/2023.07.16.549193).
All BCO-DMO datasets related to this publication can be found on the page https://www.bco-dmo.org/related-resource/915300.
See Related Datasets section for "Short-term heat stress assay: Temperature data" from the same short-term (18 hour) heat stress assay.
See results publication Brown, et al. (2023) for more detailed information on analysis and results.
* Table within file "PAM data for STHS.csv " was imported into the BCO-DMO data system with values "NA" as missing data values.
** Missing data values are displayed differently based on the file format you download. They are blank in csv files, "NaN" in MatLab files, etc.
* Column names adjusted to conform to BCO-DMO naming conventions designed to support broad re-use by a variety of research tools and scripting languages. [Only numbers, letters, and underscores. Can not start with a number]
File |
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914723_v1_sths-pam-data.csv (Comma Separated Values (.csv), 26.17 KB) MD5:5a28a43b133fd301e4a0d1e5c71cfba9 Primary data file for dataset ID 914723, version 1 |
Parameter | Description | Units |
Treatment | Treatment identifier (AMB=ambient; or 3C, 6C, 9C) | unitless |
Temperature | Temperature | degrees Celcius |
Species | Species (Genus species) | unitless |
Bleach | Bleach (phenotype) | unitless |
Colony_ID | Colony identifier | unitless |
Rep | replicate | unitless |
F | minimum fluorescence value | unitless |
Y | photochemical yield | unitless |
M | maximum amount of fluorescence | unitless |
Dataset-specific Instrument Name | Diving-PAM (Walz GmbH) |
Generic Instrument Name | Fluorometer |
Dataset-specific Description | Diving-PAM (Walz GmbH) is an Underwater Fluorometer with Miniature Spectrometer.
Pulse-amplitude modulated (PAM) fluorometry.
Photochemical yield (Fv/Fm). |
Generic Instrument Description | A fluorometer or fluorimeter is a device used to measure parameters of fluorescence: its intensity and wavelength distribution of emission spectrum after excitation by a certain spectrum of light. The instrument is designed to measure the amount of stimulated electromagnetic radiation produced by pulses of electromagnetic radiation emitted into a water sample or in situ. |
Dataset-specific Instrument Name | |
Generic Instrument Name | Spectrometer |
Dataset-specific Description | Diving-PAM (Walz GmbH) is an Underwater Fluorometer with Miniature Spectrometer. |
Generic Instrument Description | A spectrometer is an optical instrument used to measure properties of light over a specific portion of the electromagnetic spectrum. |
NSF Award Abstract:
Coral bleaching has become increasingly common on reefs worldwide as rising sea surface temperatures associated with climate change disrupt the coral-algal symbiosis. This dramatic heat stress response turns the normally colorful corals bright white, and yet during these heat stress events not all corals undergo bleaching. This project focuses on assessing the effects of bleaching by comparing pairs of corals side-byside on the reef during an ongoing heat wave, where one has bleached and the other has not, despite experiencing the same temperatures. These coral pairs have been monitored throughout three bleaching events in the past five years, providing a unique resource to address whether corals with consistently different bleaching susceptibilities have the capacity to acclimate in response to disturbances through epigenetic changes, or changes in gene expression not due to change in DNA bases. To address this, the project will characterize the impacts of bleaching or not bleaching on coral physiology, gene expression, and epigenetic patterns using coral pairs in their natural habitat during a marine heatwave. This project also provides research support for graduate student trainees, as well as data and materials for the research and training of undergraduate and high school students. This project will recruit underrepresented minority students from URI and UPenn area high schools and university undergraduates for work on computer analysis of images (benthic and colony photographs, brightfield and confocal micrographs) and sequencing data. It will also support the training of an undergraduate student at the University of Hawaiʻi in coral ecology and physiology, and the development of her senior thesis.
This project will investigate the effects of repeated heat stress events on the performance of Montipora capitata, a dominant reef builder throughout Hawaiʻi. It utilizes the timely context of paired colonies of M. capitata with bleached vs. unbleached histories that have been monitored through two past bleaching events in Hawaiʻi (2015 and 2019) and the currently ongoing 2020 event. This system allows for the unique opportunity to disentangle the consequences of heat stress versus bleaching on coral performance through time, an essential feature of reef resilience. The contrasting physiological and energetic processes these two phenotypes undergo during a heatwave are likely to result in alterations to the cellular environment within the animal that impacts epigenetic transcriptional regulation. These regulatory and energetic changes, if persistent over time, have the potential to alter coral fitness beyond the duration of the heatwave differentially between corals with contrasting bleaching phenotypes. Specifically, the project will: 1) quantify the effect of the 2020 heatwave on coral physiology during bleaching and recovery, 2) generate a corresponding archive of coral tissues and nucleic acids as a resource for future work characterizing how bleaching phenotype alters energetics and non-genetic inheritance, and 3) characterize how bleaching phenotype alters intra-generational inheritance of epigenetic marks (i.e., DNA methylation) and gene expression, and the duration of these marks and expression patterns following heat stress. This project represents an urgent assessment of an ideal system to test the legacy of coral bleaching phenotype on coral fitness. The results of this project will therefore lay the foundation for intra and cross-generational effects of bleaching vs. heat stress, which is essential for understanding coral resilience to climate change.
This award reflects NSF's statutory mission and has been deemed worthy of support through evaluation using the Foundation's intellectual merit and broader impacts review criteria.
Funding Source | Award |
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NSF Division of Ocean Sciences (NSF OCE) | |
NSF Division of Ocean Sciences (NSF OCE) |