Winter survey data from Lake Erie from Mar 2023 to May 2024

Website: https://www.bco-dmo.org/dataset/940112
Data Type: Cruise Results
Version: 1
Version Date: 2024-11-18

Project
» Lake Erie Center for Fresh Waters and Human Health (Great Lakes Center)
ContributorsAffiliationRole
McKay, Robert MichaelUniversity of WindsorPrincipal Investigator
Bullerjahn, George S.Bowling Green State University (BGSU)Co-Principal Investigator
Hudson, Neve CUniversity of WindsorScientist, Student
DeLorie, GeoffreyUnited States Coast Guard (USCG)Contact
Gresham, BrianUnited States Coast Guard (USCG)Contact
Peace, TaylorUnited States Coast Guard (USCG)Contact
Zittel, JamesUnited States Coast Guard (USCG)Contact
Mickle, AudreyWoods Hole Oceanographic Institution (WHOI BCO-DMO)BCO-DMO Data Manager

Abstract
This dataset includes winter survey data from Lake Erie collected on SAR Erie Guardian, USCGC Morro Bay, USCGC Neah Bay, CCGS Griffon, CCGS Samuel Risley, MV Vigilant from March 2023 to May 2024. The survey includes environmental observations, physico-chemical data, chlorophyll, total and dissolved nutrients, plankton taxonomic classification, and cell abundance. The Lake Erie Center for Fresh Waters and Human Health is a five-year, multi-institutional effort aimed at understanding the environmental factors and ongoing changes that influence the growth and toxicity of cyanobacterial harmful algal blooms (cHABs) in Lake Erie.


Coverage

Location: Laurentian Great Lakes (Lake Erie, Lake St. Clair, Lake Huron, Lake Superior)
Spatial Extent: N:48.417 E:-79.3847 S:41.5153 W:-88.933
Temporal Extent: 2023-10-23 - 2024-04-22

Dataset Description

Lake Erie Center for Fresh Waters and Human Health

The Lake Erie Center for Fresh Waters and Human Health is a five-year, multi-institutional effort aimed at understanding the environmental factors and ongoing changes that influence the growth and toxicity of cyanobacterial harmful algal blooms (cHABs) in Lake Erie. The Center will support three research projects. Specifically these projects address the following aims: first, how environmental cues promote or constrain the proliferation of cHAB species in mixed populations; second, how environmental cues influence toxin production by cHAB species; third, how other member of the microbial assemblage influence cHAB growth and toxicity. The Center will provide a Community Engagement Core to lead outreach activities that will inform the general public on the effects of cHABs by efforts that include: (1) a community engaged scholarship training for scientists associated with the Center, (2) community-engaged scholarship training for practitioners or community members associated with the Center, and (3) a stakeholder needs assessment for Great Lakes and environmental health literacy to inform general outreach information needs. A citizen science engagement with charter boat captains will further develop a near real-time database on cHAB severity in Lake Erie, and the Facilities Core will provide metadata that not only serve the three stated research projects, but also yield a database available to all Great Lakes scientists. The outcomes are to involve community stakeholders and researchers in the Great Lakes on issues regarding human health, climate change and awareness of threats to our fresh water resources.


Methods & Sampling

The vessel will come to a stop when the predetermined sampling station is reached, at a time decided on by the ship's command. The location and time of sampling will be recorded, as well as the environmental conditions. The trained crew members of the vessel will then use a YSI water quality sonde to collect data and that will be recorded. A Secchi disc with measurement indicators every 10 centimeters will then be deployed and recordings will be taken on both the upcast and downcast. A Van Dorn water sampler will then be used to collect water at a depth of 1 meter. Water samples are then transferred to 1 L polyethylene storage bottles or 2 L plastic storage bottles, and stored in a dark place at 4 oC until picked up by personnel on the same day. The samples will then be transported in coolers containing ice packs to Bowling Green State University (BGSU). Samples were also collected from Sandpoint Beach and Mitchell's Bay locations using the same methods and observational conventions. 

Sub-samples for chlorophyll a will be taken at BGSU using 0.4 um polycarbonate membranes and a vacuum filtration system. The filter will be placed in a screw cap polyethylene centrifuge tube and stored in a dark freezer until extraction. The samples will be extracted using 90% acetone and kept at -20 oC for 24 hours, and chlorophyll will be measured using a TD-700 fluorometer (Welschmeyer, 1994).

Total and dissolved nutrient samples will be held in acid-washed 250 mL polyethylene bottles, and stored in a dark freezer at -20 oC until they are ready to be analyzed. Dissolved nutrient sub-samples will be taken by filtering the agitated sampled water through 0.22 um filters. The data will then be shipped to the National Center for Water Quality Research at Heidelberg University (Tiffin, OH).


Data Processing Description

The meteorological data was taken directly from readings using vessel instruments, marine forecasts, and expert observations. The physico-chemical data was obtained using a YSI 600QS multiparameter sonde, and nutrient concentrations were analyzed at the National Center for Water Quality Research at Heidelberg University. Fluorometric classification of phytoplankton was measured using a FluoroProbe (bbe Moldaenke GmbH, Schwentinental, Germany), and plankton taxonomic classification and cell enumeration was conducted by Aquatic Taxonomy Specialists (Malinta, OH). The extractive chlorophyll was read using a TD-700 Fluorometer (Turner Designs Inc., San Jose, CA), the sample concentrations were then calculated with the equation below, and the averages for each site were calculated from the triplicate samples.

Chla = ((reading*volumeextracted)/volumefiltered)* dilution factor


BCO-DMO Processing Description

- imported "Winter_Lake_Erie_2024_Metadata.csv" and "Winter_Lake_Erie_2024_Deployments.csv" into BCO DMO system
- combined "Date" and "Time" to create "ISO_DateTime_UTC" field in ISO UTC format in "Winter_Lake_Erie_2024_Metadata.csv"
- modified parameter names to conform with BCO-DMO system requirements for all files
- replaced "," with "." in one "pH" value in "Winter_Lake_Erie_2024_Metadata.csv"
- exported "940112_v1_lake_erie_winter_survey_2023-2024.csv" as main datafile and "winter_lake_erie_2023-2024_deployments.csv" as supplemental file


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Data Files

File
940112_v1_lake_erie_winter_survey_2023-2024.csv
(Comma Separated Values (.csv), 13.76 KB)
MD5:c9bf20e6cf7c9f16d8b884fbff2052be
Primary data file for dataset ID 940112, version 1

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Supplemental Files

File
winter_lake_erie_2023-2024_deployments.csv
(Comma Separated Values (.csv), 1.85 KB)
MD5:cd2a0102a6f5e4e36b6caafbf2269730
Deployment metadata for dataset ID 940112, version 1

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Related Publications

Welschmeyer, N. A. (1994). Fluorometric analysis of chlorophyll a in the presence of chlorophyll b and pheopigments. Limnology and Oceanography, 39(8), 1985–1992. doi:10.4319/lo.1994.39.8.1985
Methods

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Parameters

ParameterDescriptionUnits
Station

Station of sample collection

unitless
Deployment

Cruise ID

unitless
Alternate_Deployment

Alternate cruise descriptions

unitless
Date

Date of sample collection in Y-m-d format

unitless
Time

Time of survey (EST); format: hh:mm

unitless
ISO_DateTime_UTC

Date and time of survey (UTC) formatted to ISO8601 standard: YYYY-MM-DDThh:mmZ

unitless
Lake

The name of the lake the sample was collected from.

unitless
Lat

Latitude of sample collection; positive values = North

decimal degrees
Long

Longitude of sample collection; positive values = East

decimal degrees
Max_Depth

Maximum depth of water

meters (m)
Sample_Depth

Depth of sample collection

meters (m)
Air_Temp

Air temperature

degrees C
Water_Temp

Water temperature

degrees C
Ice_cover

Percent ice cover around sampling area

percent (%)
Snow_cover

Percent snow cover on ice around sampling area

percent (%)
Ice_type

Ice type

unitless
Ice_thickness

Thickness of ice

centimeter (cm)
DO

Dissolved oxygen percent

percent (%)
DO2

Dissolved mg of oxygen per litre of water

mg/L
pH

pH

unitless (pH scale)
Sp_Cond

Specific conductance; Electrical conductivity of a water

microSiemen per cm (µS cm-1)
Secchi

Average from upcast and downcast readings; measure of water transparency

meters (m)
Cloud_cover

Percentage of cloud cover

percent (%)
Wind

Wind speed in knots

Knots (Kt)
Wind2

Wind direction in cardinal (compass) directions

unitless
Wind3

Wind direction in degrees

degree
Barometer

Barometric pressure

millibars (Mb)
Sea_state

Wave height

meters (m)
Weather

Weather observations during sample collection

unitless
Avg_Chl_a

Average extracted chlorophyll

microgram per liter (µg L-1)
NH3

Dissolved nutrients: Ammonia

microgram per liter (µg L-1)
CL

Dissolved nutrients: chloride

microgram per liter (µg L-1)
SO4

Dissolved nutrients: sulphate

microgram per liter (µg L-1)
NO2

Dissolved nutrients: Nitrite

microgram per liter (µg L-1)
NO3

Dissolved nutrients: Nitrate

microgram per liter (µg L-1)
SIO2

Dissolved nutrients: silica

microgram per liter (µg L-1)
SRP

Dissolved nutrients: Soluble Reactive Phosphorus

microgram per liter (µg L-1)
Total_Phosphorus

Particulate nutrients: Total Phosphorus

microgram per liter (µg L-1)
Total_Nitrogen

Particulate nutrients: Total Nitrogen

microgram per liter (µg L-1)
Avg_Green_Algae

Higher level taxonomic cell abundance: Green algae (Fluoroprobe)

ug/L
Avg_Bluegreen

Higher level taxonomic cell abundance: Bluegreen algae (Fluoroprobe)

ug/L
Avg_Diatoms

Higher level taxonomic cell abundance: Diatoms (Fluoroprobe)

ug/L
Avg_Cryptophyta

Higher level taxonomic cell abundance: Cryptophyta (Fluoroprobe)

ug/L
Avg_Yellow_Substances

Average Humic acid

relative units (r.u.)
Avg_Total_Conc

Total cell concentration (Fluoroprobe)

ug/L
Avg_Transmission

Average Fluoroprobe light transmission

percent (%)
Aulacoseira_islandica

Cell abundance: Aulacoseira islandica

Cells per milliliter (cells/mL)
Stephanodiscus_spp

Cell abundance: Stephanodiscus spp.

Cells per milliliter (cells/mL)
Fragilaria_spp

Cell abundance: Fragilaria spp.

Cells per milliliter (cells/mL)
Skeletonema_spp

Cell abundance: Skeletonema_spp

Cells per milliliter (cells/mL)
centric_small

Cell abundance: centric (small)

Cells per milliliter (cells/mL)
Nitzschia

Cell abundance: Nitzschia

Cells per milliliter (cells/mL)
Asterionella

Cell abundance: Asterionella

Cells per milliliter (cells/mL)
Cyanobacteria

Cell abundance: Cyanobacteria

Cells per milliliter (cells/mL)
cryptomonads

Cell abundance: cryptomonads

Cells per milliliter (cells/mL)
Dinoflagellates

Cell abundance: Dinoflagellates

Cells per milliliter (cells/mL)
chlorophytes

Cell abundance: chlorophytes

Cells per milliliter (cells/mL)
Microflagellates

Cell abundance: Microflagellates

Cells per milliliter (cells/mL)


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Instruments

Dataset-specific Instrument Name
Sample bottles, 1 or 2 L (Nalgene or equivalent), Plastic wash bottle, 500 mL
Generic Instrument Name
Bottle
Dataset-specific Description
Water samples are then transferred to 1 L polyethylene storage bottles or 2 L plastic storage bottles, and stored in a dark place at 4 oC until picked up by personnel on the same day.  Total and dissolved nutrient samples will be held in acid-washed 250 mL polyethylene bottles, and stored in a dark freezer at -20 oC until they are ready to be analyzed. 
Generic Instrument Description
A container, typically made of glass or plastic and with a narrow neck, used for storing drinks or other liquids.

Dataset-specific Instrument Name
FluoroProbe
Generic Instrument Name
Fluorometer
Dataset-specific Description
Fluorometric classification of phytoplankton was measured using a FluoroProbe (bbe Moldaenke GmbH, Schwentinental, Germany), and plankton taxonomic classification and cell enumeration was conducted by Aquatic Taxonomy Specialists (Malinta, OH). 
Generic Instrument Description
A fluorometer or fluorimeter is a device used to measure parameters of fluorescence: its intensity and wavelength distribution of emission spectrum after excitation by a certain spectrum of light. The instrument is designed to measure the amount of stimulated electromagnetic radiation produced by pulses of electromagnetic radiation emitted into a water sample or in situ.

Dataset-specific Instrument Name
National Center for Water Quality Research at Heidelberg University
Generic Instrument Name
Nutrient Autoanalyzer
Dataset-specific Description
Total and dissolved nutrient samples will be held in acid-washed 250 mL polyethylene bottles, and stored in a dark freezer at -20 oC until they are ready to be analyzed. Dissolved nutrient sub-samples will be taken by filtering the agitated sampled water through 0.22 um filters. The data will then be shipped to the National Center for Water Quality Research at Heidelberg University (Tiffin, OH).
Generic Instrument Description
Nutrient Autoanalyzer is a generic term used when specific type, make and model were not specified. In general, a Nutrient Autoanalyzer is an automated flow-thru system for doing nutrient analysis (nitrate, ammonium, orthophosphate, and silicate) on seawater samples.

Dataset-specific Instrument Name
Secchi disc
Generic Instrument Name
Secchi Disc
Dataset-specific Description
A Secchi disc with measurement indicators every 10 centimeters will then be deployed and recordings will be taken on both the upcast and downcast. 
Generic Instrument Description
Typically, a 16 inch diameter white/black quadrant disc used to measure water optical clarity

Dataset-specific Instrument Name
TD-700 fluorometer
Generic Instrument Name
Turner Designs 700 Laboratory Fluorometer
Dataset-specific Description
The extractive chlorophyll was read using a TD-700 Fluorometer (Turner Designs Inc., San Jose, CA), the sample concentrations were then calculated with the equation below, and the averages for each site were calculated from the triplicate samples.
Generic Instrument Description
The TD-700 Laboratory Fluorometer is a benchtop fluorometer designed to detect fluorescence over the UV to red range. The instrument can measure concentrations of a variety of compounds, including chlorophyll-a and fluorescent dyes, and is thus suitable for a range of applications, including chlorophyll, water quality monitoring and fluorescent tracer studies. Data can be output as concentrations or raw fluorescence measurements.

Dataset-specific Instrument Name
Vacuum manifold system to accommodate 3 filter funnels
Generic Instrument Name
vacuum manifold
Dataset-specific Description
Vacuum manifold system to accommodate 3 filter funnels
Generic Instrument Description
A device that is used for the vacuum-driven processing of multiwell strips or plates, or spin columns.

Dataset-specific Instrument Name
2 L Van Dorn water sampler
Generic Instrument Name
Van Dorn water sampler
Dataset-specific Description
A Van Dorn water sampler will then be used to collect water at a depth of 1 meter. 
Generic Instrument Description
A free-flushing water sample bottle comprising a cylinder (polycarbonate, acrylic or PVC) with a stopper at each end. The bottle is closed by means of a messenger from the surface releasing the tension on a latex band and thus pulling the two stoppers firmly into place. A thermometer can be mounted inside the bottle. One or more bottles can be lowered on a line to allow sampling at a single or multiple depth levels. Van Dorn samplers are suitable for for physical (temperature), chemical and biological sampling in shallow to very deep water. Bottles are typically lowered vertically through the water column although a horizontal version is available for sampling near the seabed or at thermoclines or chemoclines. Because of the lack of metal parts the bottles are suitable for trace metal sampling, although the blue polyurethane seal used in the Alpha version may leach mercury. The Beta version uses white ASA plastic seals that do not leach mercury but are less durable.

Dataset-specific Instrument Name
YSI 600QS multiparameter sonde
Generic Instrument Name
YSI Sonde 6-Series
Dataset-specific Description
The physico-chemical data was obtained using a YSI 600QS multiparameter sonde, and nutrient concentrations were analyzed at the National Center for Water Quality Research at Heidelberg University.
Generic Instrument Description
YSI 6-Series water quality sondes and sensors are instruments for environmental monitoring and long-term deployments. YSI datasondes accept multiple water quality sensors (i.e., they are multiparameter sondes). Sondes can measure temperature, conductivity, dissolved oxygen, depth, turbidity, and other water quality parameters. The 6-Series includes several models. More from YSI.


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Deployments

NB-2024-03

Website
Platform
USCGC NEAH BAY
Start Date
2024-03-12
End Date
2024-03-12

NB-2024-02

Website
Platform
USCGC NEAH BAY
Start Date
2024-02-20
End Date
2024-02-20

NB-2024-01

Website
Platform
USCGC NEAH BAY
Start Date
2024-01-22
End Date
2024-01-22

GR-2024-01

Website
Platform
CCGS GRIFFON
Start Date
2024-02-03
End Date
2024-02-03

GR-2024-02

Website
Platform
CCGS GRIFFON
Start Date
2024-02-09
End Date
2024-02-09

GR-2024-03

Website
Platform
CCGS GRIFFON
Start Date
2024-02-22
End Date
2024-02-22

GR-2024-04

Website
Platform
CCGS GRIFFON
Start Date
2024-03-04
End Date
2024-03-04

GR-2024-05

Website
Platform
CCGS GRIFFON
Start Date
2024-03-07
End Date
2024-03-07

MB-2024-01

Website
Platform
USCGC Morro Bay
Start Date
2024-12-04
End Date
2024-12-04

MB-2024-02

Website
Platform
USCGC Morro Bay
Start Date
2024-01-08
End Date
2024-01-08

MB-2024-03

Website
Platform
USCGC Morro Bay
Start Date
2024-01-31
End Date
2024-01-31

MB-2024-04

Website
Platform
USCGC Morro Bay
Start Date
2024-03-21
End Date
2024-03-21

MB-2024-05

Website
Platform
USCGC Morro Bay
Start Date
2024-05-19
End Date
2024-05-19

OF-2024-01

Website
Platform
Erie Guardian
Start Date
2024-10-23
End Date
2024-10-23

OF-2024-02

Website
Platform
Vigilant
Start Date
2024-04-15
End Date
2024-04-15

OF-2024-03

Website
Platform
Vigilant
Start Date
2024-04-22
End Date
2024-04-22

SR-2024-01

Website
Platform
CCGS SAMUEL RISLEY
Start Date
2024-03-19
End Date
2024-03-19

SR-2024-02

Website
Platform
CCGS SAMUEL RISLEY
Start Date
2024-03-28
End Date
2024-03-28


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Project Information

Lake Erie Center for Fresh Waters and Human Health (Great Lakes Center)


Coverage: Laurentian Great Lakes


NSF Award Abstract:
The Lake Erie Center for Fresh Waters and Human Health is a five-year, multi-institutional effort aimed at understanding the environmental factors and ongoing changes that influence the growth and toxicity of cyanobacterial harmful algal blooms (cHABs) in Lake Erie. The Center will support three research projects. Specifically these projects address the following aims: first, how environmental cues promote or constrain the proliferation of cHAB species in mixed populations; second, how environmental cues influence toxin production by cHAB species; third, how other member of the microbial assemblage influence cHAB growth and toxicity. The Center will provide a Community Engagement Core to lead outreach activities that will inform the general public on the effects of cHABs by efforts that include: (1) a community engaged scholarship training for scientists associated with the Center, (2) community-engaged scholarship training for practitioners or community members associated with the Center, and (3) a stakeholder needs assessment for Great Lakes and environmental health literacy to inform general outreach information needs. A citizen science engagement with charter boat captains will further develop a near real-time database on cHAB severity in Lake Erie, and the Facilities Core will provide metadata that not only serve the three stated research projects, but also yield a database available to all Great Lakes scientists. The outcomes are to involve community stakeholders and researchers in the Great Lakes on issues regarding human health, climate change and awareness of threats to our fresh water resources.

The Center is jointly supported by NSF and by the National Institute for Environmental Health Sciences (NIEHS).

This award reflects NSF's statutory mission and has been deemed worthy of support through evaluation using the Foundation's intellectual merit and broader impacts review criteria.



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Funding

Funding SourceAward
NSF Division of Ocean Sciences (NSF OCE)

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