Dataset: Fish IDs and measurements
Deployment: White_2012

Sex, Tag ID, length, and mass of each fish used in the trials.

Principal Investigator:

J. Wilson White (University of North Carolina - Wilmington, UNC-Wilmington)

Co-Principal Investigator:

Susanne Brander (University of North Carolina - Wilmington, UNC-Wilmington)

Contact:

J. Wilson White (University of North Carolina - Wilmington, UNC-Wilmington)

BCO-DMO Data Manager:

Hannah Ake (Woods Hole Oceanographic Institution, WHOI BCO-DMO)

Project:

Impacts of size-selective mortality on sex-changing fishes (Goby size-selection)

Current State:

Final no updates expected

Version:

Final

Data URL:

https://osprey.bco-dmo.org/dataset-deployment/713295/data

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Description

Identification data for each tagged adult Menidia beryllina used in spawning trials, post dissection.

Methods & Sampling

Dataset acquisition description

Fish survey data were collected by beach seine in the Suisun Bay region of the San Francisco Bay-Delta by Susanne Brander and Bryan Cole. Sampling methodology is fully described in Brander et al. (2013).

Laboratory spawning trials were used to determine the relationship between sex ratio and egg production. Adult inland silversides were placed together in 95 liter circular tanks and allowed to spawn on an artificial spawning substrate (polyester yarn clumps). Substrate was removed daily and inspected for eggs; fertilization was determined by coloration. Full details are provided in White et al. (2017).

Data Processing Description

Dataset Processing Description

Scripts that were used to process these data can be found here: github.com/jwilsonwhite/IPM_statespace. Model code implements an explicit-sex, age-structured model that examines the effects of sex change (due to endocrine disruption) on fish populations. The code also fits a nonlinear mating function to laboratory spawning data, for use in parameterizing the model. All methodological details are provided in White et al. (2017).

BCO-DMO Data Processing Notes:

-removed question marks from data
-replaced all blank cells with nd
-in cases where just questions marks were entered as notes, question marks were replaced with "unknown"
-replaced data -9999 with nd

More information about this dataset deployment

Funding

Award Number	Funding Source
OCE-1435473	NSF Division of Ocean Sciences

Instruments

Purse-seine Fishing Gear

Supplied Name: Beach seine

Supplied Description:

Used to collect samples

Instrument Type

Generic Name: Purse-seine Fishing Gear

Acronym: Purse-seine

Generic Description:

A purse seine is a large wall of netting deployed in a circle around an entire school of fish. The seine has floats along the top line with a lead line of chain along the bottom. Once a school of fish is located, a skiff pulls the seine into the water as the vessel encircles the school with the net. A cable running along the bottom is then pulled in, "pursing" the net closed on the bottom, preventing fish from escaping by swimming downward. The catch is harvested by bringing the net alongside the vessel and brailing the fish aboard.

Parameters

Supplied Name	Supplied description	Supplied Units	Standard Name
sex	Sex of fish; F = femaile; M= male	unitless	no_bcodmo_term
tag	Alphanumeric tag number	unitless	no_bcodmo_term
id	Fish ID associated with tag	unitless	no_bcodmo_term
ripe	Were eggs ripe at time of dissection? Y = yes; N = no; X = male fish	unitless	no_bcodmo_term
note	Observer notes	unitless	comment
SL	Standard length of fish	millimeters	no_bcodmo_term
mass	Mass of fish	grams	no_bcodmo_term
gonad_mass	Mass of fish gonad	grams	no_bcodmo_term

Database

Contribute Data

Dataset: Fish IDs and measurements
Deployment: White_2012

Dataset acquisition description

Dataset Processing Description

Database

Contribute Data

Dataset: Fish IDs and measurementsDeployment: White_2012

Dataset acquisition description

Dataset Processing Description

Dataset: Fish IDs and measurements
Deployment: White_2012