bioproject_accession |
NCBI Bioproject accession ID
|
unitless |
BioProject |
biosample_accession |
NCBI Biosample accession ID
|
unitless |
BioSample |
sample_name |
Submitter sample name
|
unitless |
sample |
sra_sample_accession |
NCBI SRA sample accession ID
|
unitless |
SRA_sample |
sample_accession_title |
Sample accession title
|
unitless |
sample_descrip |
organism_name |
Organism name by submitter
|
unitless |
taxon |
organism_taxonomy_id |
NCBI Taxonomy ID
|
unitless |
taxon_code |
organism_taxonomy_name |
NCBI organism name related to taxonomy id
|
unitless |
taxon_code |
keywords |
NCBI biosample keywords
|
unitless |
sample_descrip |
biosample_package |
NCBI biosample attribute package and package version
|
unitless |
sample_descrip |
collection_date |
Collection date of organism
|
unitless |
date |
env_broad_scale |
Broad-scale environmental context
|
unitless |
sample_descrip |
env_local_scale |
Local-scale environmental context
|
unitless |
sample_descrip |
env_medium |
Material displaced by the entity at time of sampling
|
unitless |
sample_descrip |
geo_loc_name |
Geographic location of the origin of the sample
|
unitless |
region |
host |
Host name
|
unitless |
taxon |
sampling_lat |
Latitude of sampling location, south is negative
|
decimal degrees |
lat |
sampling_lon |
Longitude of sampling location, west is negative
|
decimal degrees |
lon |
depth |
Sampling depth
|
meter (m) |
depth |
host_length |
Length of the subject
|
centimeter (cm) |
length |
source_material_id |
Unique identifier assigned to a material sample used for extracting nucleic acids, and subsequent sequencing.
|
unitless |
sample |
status |
Sample NCBI status (live)
|
unitless |
no_bcodmo_term |
when |
When status set
|
unitless |
no_bcodmo_term |
access |
Accessibility: public
|
unitless |
no_bcodmo_term |
date_publication |
Date of publication at NCBI
|
unitless |
ISO_DateTime_UTC |
date_last_update |
Data of last update at NCBI
|
unitless |
ISO_DateTime_UTC |
date_submission_date |
Date of submisison at NCBI
|
unitless |
ISO_DateTime_UTC |
sra_run_accession |
NCBI SRA run accession ID
|
unitless |
SRA_run |
sra_study_accession |
NCBI study accession ID
|
unitless |
SRA_study |
object_status |
Status of object
|
unitless |
no_bcodmo_term |
library_ID |
Unique identifier for the sequencing library (can be the sample name repeated).
|
unitless |
sample |
title |
Library title
|
unitless |
seq_descrip |
library_strategy |
Sequencing library strategy
|
unitless |
seq_descrip |
library_source |
Source of sequencing library
|
unitless |
seq_descrip |
library_selection |
Selection used for sequencing library
|
unitless |
seq_descrip |
library_layout |
single or paired end sequencing reads
|
unitless |
seq_descrip |
platform |
Sequencing platform manufacturer
|
unitless |
instrument |
instrument_model |
Sequencer model
|
unitless |
inst_model |
design_description |
Description explaining how this library was prepared and sequenced
|
unitless |
seq_descrip |
filetype |
File type
|
unitless |
datatype |
fasta_filename1 |
Forward reads file name
|
unitless |
file_name |
fasta_filename2 |
Reverse reads file name
|
unitless |
file_name |