Parameter: ID_Method

Dataset: 
Pseudo-nitzschia amplicon sequence variants (ASVs)
Parameter: 
sampling_method
Master parameters information
Short Name:
 sampling_method
Short Description:
 sampling_method
Official Name:
 sampling_method
No Data Value:
 nd
Description:
 

Method used to collect sample.

Dataset-parameters information
Supplied Name: 
ID_Method
Supplied Units: 
unitless
Datatype: 
String
Conversion Necessary: 
no
Conversion Utility: 
No Data Value: 
nd
Description: 
The method used to identify the ASV as belonging to Pseudo-nitzschia sp. QIIME2 naiveBayes refers to the scikit-learn na?ve Bayes machine learning classifier (Pedregosa et al 2011) at default settings in QIIME2 (Bolyen et al 2019) using the curated database of existing Pseudo-nitzschia sequences in NCBI in Table S2 of Sterling et al. Megablast refers to using BLAST+ version 2.9 with the nucleotide (nt) database and manually examining the identification of ASVs with query coverage > 75% to known Pseudo-nitzschia sequences.