Dataset: multispecies-biomass dynamics model

Name: ADMB computer program for multispecies-biomass dynamics model (NW_AtlEcosysConnect project)
Published: 2014-12-12
Keywords: biota, oceans

Cite This Dataset

Project:

CAMEO: Patterns of Connectivity in Northwest Atlantic Fishery Ecosystems (NW_AtlEcosysConnect)

Program:

Comparative Analysis of Marine Ecosystem Organization (CAMEO)

Principal Investigator:

Jeremy Collie (University of Rhode Island, URI-GSO)

Student:

Minho Kang (University of Rhode Island, URI-GSO)

BCO-DMO Data Manager:

Nancy Copley (Woods Hole Oceanographic Institution, WHOI BCO-DMO)

Version:

Version Date:

2014-12-12

Restricted:

Release Date:

2020-11-02

Validated:

Current State:

Final with updates expected

ADMB computer program for multispecies-biomass dynamics model (NW_AtlEcosysConnect project)

Abstract:

ADMB computer program for multispecies-biomass dynamics model.

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Description

This dataset includes the source computer code, an example data file, the executable program, and sample output. The sample biomass and catch data spans from 1979 to 2008 and is from the Northeast Shelf Large Marine Ecosystem. Regions for the analysis include: Georges Bank (GB), Gulf of Maine (GoM), and Southern New England (SNE). Model input is observed biomass and catch for multiple migrating and non-migrating fish species; model output includes predicted biomass for the species. The code was written for AD Model Builder by Minho Kang. ADMB files are written as template files, e.g. multispecies.tpl. The template file is translated to C++, multispecies.cpp, which is compiled to multispecies.obj.

- source computer code: multispecies.tpl
- executable program: multispecies.exe
- example data file: multispecies.dat
- sample output: multispecies.rep
- description not available (not essential; generated automatically by ADMB): multispecies.cpp
- description not available (not essential; generated automatically by ADMB): multispecies.htp
- description not available (not essential; generated automatically by ADMB): multispecies.obj
- description not available (not essential; generated automatically by ADMB): multispecies.tds

Data Files

File
multispecies-biomass_dynamics_model.csv (Comma Separated Values (.csv), 1.01 KB) MD5:fa75273f4d97281ebbd7d6fa173dbb95 Primary data file for dataset ID 543195