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The light/dark bottle is a way of measuring primary production by comparing before and after concentrations of dissolved oxygen.
Bottles containing seawater samples with phytoplankton are incubated for a predetermined period of time under light and dark conditions. Incubation is preferably carried out in situ, at the depth from which the samples were collected. Alternatively, the light and dark bottles are incubated in a water trough on deck, and neutral density filters are used to approximate the light conditions at the collection depth.
Rates of net and gross photosynthesis and respiration can be determined from measurements of dissolved oxygen concentration in the sample bottles.