Dataset: Marine Bacterial Isolates
Deployment: SantaCruz_Plankton_Jiang

Bacterial isolates from marine diatom Psuedo-nitzschia

Principal Investigator:

Sunny Jiang (University of California-Irvine, UC Irvine)

BCO-DMO Data Manager:

Danie Kinkade (Woods Hole Oceanographic Institution, WHOI BCO-DMO)

Project:

Interactions of bacteria, viruses and bloom-forming diatom genus Pseudo-nitzschia (bacteria, virus, diatom interactions)

Current State:

Final no updates expected

Version:

2015-08-05

Version Date:

2015-08-05

Data URL:

https://osprey.bco-dmo.org/dataset-deployment/614804/data

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Description

Methods & Sampling

Dataset acquisition description

Single Pseudo-nitzschia cell isolates were obtained from bloom seawater samples collected from Santa Cruz Wharf, California. Bacteria associated with the single pseudo-nizschia cell was isoalted on marine agar. Sequences were analyzed using Seqman II. Bacterial taxon for each sequence was identified and named by the homologous 16S sequence in Genbank using BLAST.

Data Processing Description

Dataset Processing Description

More information about this dataset deployment

Funding

Award Number	Funding Source
OCE-1131770	NSF Division of Ocean Sciences

Instruments

None available yet

Parameters

Supplied Name	Supplied description	Supplied Units	Standard Name
taxon	Bacterial taxon.	dimensionless	taxon
strain	Bacterial strain.	dimensionless	no_bcodmo_term
GenBank_accession	Genbank accession number.	dimensionless	accession_number

Database

Contribute Data

Dataset: Marine Bacterial Isolates
Deployment: SantaCruz_Plankton_Jiang

Dataset acquisition description

Dataset Processing Description

Database

Contribute Data

Dataset: Marine Bacterial IsolatesDeployment: SantaCruz_Plankton_Jiang

Dataset acquisition description

Dataset Processing Description

Dataset: Marine Bacterial Isolates
Deployment: SantaCruz_Plankton_Jiang