Parameter: NCBI SRA study accession (SRP)

Short Description:

NCBI SRA study accession (SRP)

Short Name:

SRA_study

Official Name:

SRA_study

Description

The National Center for Biotechnology Information (NCBI) study accession in the Sequence Read Archive (SRA).

A Study is a set of experiments and has an overall goal. It contains the project metadata describing a sequencing study or project. Imported from NCBI BioProject.

Identifier usually begins with SRP

Datasets associated with this parameter

Dataset Name	Brief Description	Project	PI-Supplied Parameter Name
16S V4 rRNA gene tag sequences from reef seawater	16S V4 rRNA gene tag sequences from reef seawater	Quantitative coral microbiomes	SRA_Study
18s DNA sequence of potential prey of siphonophores		SiphWeb	SRA Study
Acropora cervicornis 16S Sequences Metadata and NCBI SRA accessions associated with Williams et al., 2022	Acropora cervicornis 16S Sequences Metadata and NCBI SRA accessions associated with Williams et al., 2022	Coral Rickettsiales, Resilient Acerv	SRA_Study
Acropora cervicornis bleaching sequences	Acropora cervicornis bleaching sequences	Coral Rickettsiales	SRA_study_ID, SRA_title
Gulf of Alaska copepods: annotated transcriptomes	The dataset includes the annotation files of nine high-quality de novo transcriptomes generated from shotgun assemblies of short-sequence reads.	Diapause preparation, Neocalanus Gulf of Alaska	Study_Accession
Kāneʻohe Bay Time-series - microbial community	Kāneʻohe Bay Time-series - microbial community	Pelagibacteromics	study
Kāneʻohe Bay Time-series - phytoplankton and biogeochemistry	Kāneʻohe Bay Time-series - phytoplankton and biogeochemistry	Pelagibacteromics	Amplicon_study, Metagenome_study
Long-term diatom microbiome data and analysis package		LTPE	SRA_Study
Microbial eukaryotic diversity: Mid-Cayman Rise SRA dataset	18S rRNA amplicon sequencing of microbial eukaryotes	Microbial eukaryotes at hydrothermal vents	Study_Accession
Microorganisms associated with pyrosomes	16S rRNA sequencing pyrosome-associated microorganisms	Gelatinous Grazer Feeding	sra_study_accession
Multiyear RNA-Seq of Neocalanus flemingeri stages CV and Adult Female	Multiyear RNA-Seq of Neocalanus flemingeri stages CV and Adult Female	Diapause preparation, Neocalanus Gulf of Alaska	Study_Accession
Northern California Current Microorganisms	16S rRNA gene of microorganisms	Gelatinous Grazer Feeding	sra_study_accession
OC1703A Sediment 16S rRNA and 16S rRNA gene amplicon sequences	OC1703A Sediment 16S rRNA and 16S rRNA gene amplicon sequences	Deep Sediment N Fix	SRA_title
OC1703A Sediment MG-MT	OC1703A Sediment MG-MT	Deep Sediment N Fix	SRA_study_ID, SRA_title
OC1703A Sediment nifH amplicon sequences	OC1703A Sediment nifH amplicon sequences	Deep Sediment N Fix	SRA_study
Pocillopora sequences from 2019		Pocilloporid Coral Diversity	SRA_Study
RADseq data from Atlantic silversides used for linkage and QTL mapping		GenomAdapt	SRA_study_accession
Salp and pteropod associated microorganisms	16S rRNA sequencing salp and pteropod microorganisms	Gelatinous Grazer Feeding	sra_study_accession
Seagrass Microbiome Data		Eelgrass disease	Submission
Sinking particle sample information for BATS microbial communities		Marine Plankton Aggregation	SRA_study_ID
Sponge Symbiont Carbon and Nutrient Cycling	Sponge Symbiont Carbon and Nutrient Cycling	Sponge_Loop	SRAStudy
T. rotula Common Garden Experiment	T. rotula Common Garden Experiment	Phytoplankton Community Responses	Study_Accession
T. rotula microbiome global sample	T. rotula microbiome global sample	Diatom Gene Flow	Study_Accession
Winam Gulf Metagenomic Time Series	Metagenomic Time Series of Winam Gulf, Lake Victoria from 2022-2023	ASI Lake Victoria	StudyID
Zostera marina whole genome resequencing	Zostera marina whole genome resequencing	ZosteraEcoGenomics	SRA_accession

Programs associated with this parameter

None

Status message

Database

Contribute Data

Parameter: NCBI SRA study accession (SRP)