Parameter: genetic material concentration

Short Description:

genetic material concentration

Short Name:

genetic_conc

Official Name:

genetic_conc

Units:

various

Graphable:

Yes

No Data Value:

Description

Concentration or count of genetic material.

Datasets associated with this parameter

Dataset Name	Brief Description	Project	PI-Supplied Parameter Name
Bugula neritina mesocosm symbiont titers	Symbiont titers in B. neritina colonies grown under different conditions	BiogeogDefensiveSymb	Parent, Cont_18w_16, Pred_18w_16, Cont_18w_22, Pred_18w_22, Cont_23w_16, Pred_23w_16, Cont_23w_22, Pred_23w_22
Gene Abundance		Submerged Wetland Carbon	Bacteria, dsrA, Archaea
Gene copies	Number of gene markers identified in sediment.	LittleLagoonGroundwater	West, West_SE, Mouth, Mouth_SE, East, East_SE
Metagenome and metatranscriptome sequences from deep-sea hydrothermal vent microbial communities	Metagenome and metatranscriptome sequences from deep-sea hydrothermal vent microbial communities	frenemies	BASES
Pooled sequencing data from field-collected Eurytemora affinis		Evolutionary genomics of a copepod	Bases
qPCR	LMG1801 qPCR	Oxidation of Urea N	Thaumarchaeota_ureC, AOB_amoA, NOB_16S_rRNA, bact16S, Thaum_16S, WCA_amoA, WCB_amoA
Quantitative PCR data	Quantitative PCR targeting Trichodesmium, UCYN-A, UCYN-B, gamma-24774A11, and Het1, based on the nifH gene.	Microbial associations in zooplankton	UCYN_A, Gamma_24774A11, group_B, Tricho, Het1
SCCS Diazotroph Abundances	qPCR abundance data	BSUCS	UCYN_B_ave, UCYN_B_stdev, Tricho_ave, Tricho_stdev, Het_2_ave, Het_2_stdev, g_24774A11_ave, UCYN_A1_ave, g_24774A11_stdev, UCYN_A1_stdev, UCYN_A2_ave, UCYN_A2_stdev
SERC 2019 viral dilution incubations	Gene copy number counts and 16S analyses of July 2019 Rhode River surface water incubated with or without viral dilution	identify cyano infections	Genes_16S, RNR_Genes
SERC time series	Water quality data, gene copy number counts, and 16S analyses from Rhode River samples collected at SERC	identify cyano infections	Genes_16S_1, Genes_16S_2, RNR_Genes_1, RNR_Genes_2
South Atlantic Bight nitro cruises 2014	Environmental data, nitrifier abundance, ammonia oxidation rates from the South Atlantic Bight	GCE LTER	arch_amoA, crecarch_rrs, betapro_amoA, bacteria_rrs, nitrospina_rrs, diatom_rrs
Spatiotemporal characterization of nirK and nirS	Spatiotemporal characterization of nirK and nirS abundance in San Francisco Bay	N-Cycling Microbial Communities	bacterial_16S_sd_DNA, nirK_mean_dry, nirK_sd_dry, nirS_mean_dry, nirS_sd_dry, bacterial_16S_mean_dry, nirK_mean_DNA, bacterial_16S_sd_dry, nirK_sd_DNA, nirS_mean_DNA, nirS_sd_DNA, bacterial_16S_mean_DNA

Programs associated with this parameter

None

Status message

Database

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Parameter: genetic material concentration