Parameter: NCBI SRA experiment accession (SRX)

Short Description:

NCBI SRA experiment accession (SRX)

Short Name:

SRA_experiment

Official Name:

SRA_experiment

Description

The National Center for Biotechnology Information (NCBI) Experiment accession in the Sequence Read Archive (SRA).

An Experiment is a consistent set of laboratory operations on input material with an expected result. It contains the metadata describing the library, platform selection, and processing parameters involved in a particular sequencing experiment.

Identifier usually begins with SRX

Datasets associated with this parameter

Dataset Name	Brief Description	Project	PI-Supplied Parameter Name
18s DNA sequence of potential prey of siphonophores		SiphWeb	Experiment
Acropora cervicornis 16S Sequences Metadata and NCBI SRA accessions associated with Williams et al., 2022	Acropora cervicornis 16S Sequences Metadata and NCBI SRA accessions associated with Williams et al., 2022	Coral Rickettsiales, Resilient Acerv	SRA_Experiment, Experiment_Title
Gulf of Alaska copepods: annotated transcriptomes	The dataset includes the annotation files of nine high-quality de novo transcriptomes generated from shotgun assemblies of short-sequence reads.	Diapause preparation, Neocalanus Gulf of Alaska	Experiement_Accession
Metagenome and metatranscriptome sequences from deep-sea hydrothermal vent microbial communities	Metagenome and metatranscriptome sequences from deep-sea hydrothermal vent microbial communities	frenemies	EXPERIMENT
Multiyear RNA-Seq of Neocalanus flemingeri stages CV and Adult Female	Multiyear RNA-Seq of Neocalanus flemingeri stages CV and Adult Female	Diapause preparation, Neocalanus Gulf of Alaska	Experiment_Accession
Pocillopora sequences from 2019		Pocilloporid Coral Diversity	Experiment
Pooled sequencing data from field-collected Eurytemora affinis		Evolutionary genomics of a copepod	Experiment
RADseq data from Atlantic silversides used for linkage and QTL mapping		GenomAdapt	SRA_experiment_accession
Santa Monica Bay 18S-V4 sequencing		SPOT	SRA
Sponge Symbiont Carbon and Nutrient Cycling	Sponge Symbiont Carbon and Nutrient Cycling	Sponge_Loop	Experiment

Programs associated with this parameter

None

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Parameter: NCBI SRA experiment accession (SRX)