13C-sterols |
Bruker Topspin NMR files for 13C-labeled sterols used for metabolic studies |
PhytosterolsZooplank |
file_link |
acoustic backscatter - BIOMAPER-II |
Acoustic backscatter data collected by BIOMAPERII |
SOGLOBEC, Southern Ocean Krill |
mat |
ADCP Transects |
ADCP Transects |
MuLTI-2 |
Data_File |
Alvin dive plans - reports - sample sheets |
Alvin dive plans - reports PDF |
vent O2 NO3 roles |
pdf_link |
Assembled metagenome sequences > 500 bp |
Assembled metagenome sequences > 500 bp from EPR, Lo'ihi, and control |
EPR and Loihi basalt genomes |
Fasta_file_link |
AT39-01 CathodicEET SEM |
|
North Pond 2017 |
imagelink |
AT39-01_FLOCS_SEM |
Scanning Electron Microscopy (SEM) photographs of biofilms and mineral alteration products |
North Pond 2017 |
package_url |
beta-LTRANS-ADCIRC software |
Source code, license, example input and visualization files for beta-LTRANS-ADCIRC, a particle tracking model that runs with ADCIRC circulation model prediction. |
EstuarineMetaDyn |
file_download |
CESM1-BEC hindcast |
Selected output from the hindcast simulation of CESM1-BEC for the Southern Ocean |
SO Carb Chem Change |
file_link |
Ciliate PIV videos |
Ciliate escape response micro-PIV videos |
Protist Behavior and Imposed Flow |
file_link |
Coastal Gulf of Maine model output |
|
GOMEPRO, MuLTI-2 |
video_file_link |
Copepod PIV videos |
Copepod swimming Particle image velocimetry raw videos |
Protist Behavior and Imposed Flow |
file_link |
Coral colony photos from 2015 bleaching event |
|
Bleaching American Samoa |
image_link |
Coral images and accession numbers |
Species images and accession numbers for tissue, mucus, and holobionts analyzed. |
Coral Microbial Relationships |
filename1, filename2, filename3 |
Data and sequence information from analysis pipeline |
Data from various stages of the analysis pipeline. |
Contagious coral diseases? |
file_link |
dataset1_Krug_et_al_2015: Supplemental tables |
Supplemental tables for Krug et al (2015) Syst. Biol. |
PLDvFST |
table_link |
Deep convection simulation using MITgcm |
MITgcm model deep convection simulation output |
IVOMLS |
file_download_link |
Fe_Vit12_MetaT_Co-Limitation_RossSea_2014 |
Iron and vitamin B12 metatranscriptomincs co-limitation in Ross Sea waters, 2014 |
Ross_Sea_Microb_Ecophys |
download_link |
GN01 CTD cast logs |
CTD cast logs from GEOTRACES-Arctic Section cruise HLY1502 (pdf) |
U.S. GEOTRACES Arctic |
filename |
GN01 Pump cast logs |
Pump cast logs from GEOTRACES-Arctic Section cruise HLY1502 (pdf) |
U.S. GEOTRACES Arctic |
filename |
GN01 Sample logs |
Water sample logs from GEOTRACES-Arctic Section cruise HLY1502 (pdf) |
U.S. GEOTRACES Arctic |
filename |
GP15 GTC Cast Sheets |
Original scanned cast sheets (jpg and pdf formats) of the GTC rosette casts |
U.S. GEOTRACES PMT |
file_link |
GP15 GTC GeoFish Logs |
Original scanned sample logs (jpg format) from GeoFish tows |
U.S. GEOTRACES PMT |
file_link |
GP15 GTC Sample Logs |
Original scanned sample logs (jpg and pdf formats) from the GTC rosette casts |
U.S. GEOTRACES PMT |
file_link |
GP15 ODF Cast Sheets |
Original scanned cast sheets (jpg format) of ODF casts on the GP15 cruise |
U.S. GEOTRACES PMT |
file_link |
GP15 ODF Console Logs |
Original scanned console logs (jpg format) of ODF casts on the GP15 cruise |
U.S. GEOTRACES PMT |
file_link |
GP16 Particulate Iron Speciation |
X-ray absorption spectroscopy data for particulate iron |
EPZT Particle Geochemistry, U.S. GEOTRACES EPZT |
Data_File |
Groundwater microorganism retroelement protein sequences |
Protein sequences from diversity-generating retroelements in groundwater microorganisms |
Viruses in Methanotrophic Marine Ecosystems |
file_link |
Halanych_2013: Video of acorn worm tubes |
Video of acorn worm tubes |
Antarctic Inverts |
file_link |
Harris Creek May 2015 Acoustic Time Series: raw files |
Raw files from low-power SoundTrap recorders and hydrophones |
Larval settlement soundscapes |
file_link |
Kimbe Bay ADCP |
Current velocities from 4 depths recorded by ADCP deployed in Kimbe Bay, New Britain, Papua New Guinea. |
Pop connectivity of coral reef fishes |
matlab_file |
limpet R-code and images |
Respiration chamber images and R-code for analysis of size measurements and derived respiration rates |
Experiments in a Model Ecosystem |
file_link |
LTRANS v.2b software |
Source code, license, example input and visualization files for LTRANS v.2b, a particle tracking model that runs with the Regional Ocean Modeling System (ROMS) |
TRANSPORT |
file_download |
Mass spec proteomics data |
Proteomics on diatom response to allelopathy from red tide dinoflagellate (Karenia brevis). |
Plankton Chemical Cues |
file_link |
Mass spectrometry lipidomics data |
MS-based lipidomics on diatom response to allelopathic chemicals from the red tide dinoflagellate (Karenia brevis) |
Plankton Chemical Cues |
download_link |
Mass spectrometry metabolomics data |
MS-based polar metabolomics on diatom response to allelopathic chemicals from red tide dinoflagellate (Karenia brevis) |
Plankton Chemical Cues |
download_link |
Middle Marsh 2014 Acoustic Time Series: raw files |
Raw files from low-power SoundTrap recorders and hydrophones |
Larval settlement soundscapes |
file_link |
Model outputs |
Outputs from four ocean models describing the waters of the Belizean Barrier Reef. |
Elacatinus Dispersal I |
Download_link |
MS metabolomics of blue crab urine |
Raw LCMS data files from study of metabolomics of blue crab urine inducing fear in prey |
SensoryNCE |
download_link |
Mud Patch foraminifera images |
Mud Patch foraminifera images |
OA, Hypoxia and Warming |
download_link |
multispecies-biomass dynamics model |
ADMB computer program for multispecies-biomass dynamics model |
NW_AtlEcosysConnect |
file |
Mussel bed phototransects |
Phototransects of rocky intertidal mussel beds |
Mussel Bed Disturbance |
image_link, image_thumbnail, site_images_link |
NMR metabolomics K brevis exudates |
NMR-based metabolomics on diatom response to allelopathic chemicals from red tide dinoflagellate (Karenia brevis) |
Plankton Chemical Cues |
download_link |
NMR metabolomics of blue crab urine |
NMR spectral files from study of metabolomics of blue crab urine inducing fear in prey |
SensoryNCE |
download_link |
NMR-based polar metabolomics data |
NMR-based polar metabolomics on diatom response to allelopathic chemicals from the red tide dinoflagellate (Karenia brevis) |
Plankton Chemical Cues |
download_link |
NorthPond_ALS_STXM |
Scanning Transmission X-Ray Microscopy raw images and spectra for aXis 2000 analysis software package |
North Pond Microbes |
download |
NPHZ-V |
NPHZ-V ecosystem model. |
Phage-Bacteria-Nets |
file |
PIV data - final turbulence tank analysis |
Velocity fields from turbulence tank, with analysis performed to describe its turbulence characteristics. |
DiatomTrajectories |
filename |
Planktonic predator-prey behavior - video clips |
High-speed videos of larval clownfish, Amphiprion ocellaris predators and copepod prey |
PreyEscape |
clip_link |
Predator-prey simulation model |
R computer code and associated data files for predator-prey simulation model. |
NW_AtlEcosysConnect |
file |
Pxiphias PopStructure mtDNA |
Pleuromamma xiphias mitochondrial genetic data (Atlantic; mtDNA) for analyses of population structure across the Atlantic Ocean |
Plankton Population Genetics |
file_link |
Raw mapping data for sequencing |
Experimental data from coral disease analysis in raw form for sequencing. |
Contagious coral diseases? |
file_link |
Rockfish microhaplotype sequences |
Links to sequence files associated with this project |
Larval Dispersal in Kelp Rockfish |
file_link |
Sediment trap gel images |
Sediment trap gel images of settled particles. |
RapAutParticleFlux |
Image_zip_download_link |
Si Depletion Experiment: EDS and SEM |
|
Coccolithophore Silicon Requirements |
SEM_image_link |
Spawning Cruise ADCP |
ADCP water column data from a cruise inside Coos Bay in March 2014 |
Storm larvae |
file |
Stakeholder workgroup summary reports |
Summary reports containing information on the OysterFutures stakeholder workgroup discussions and research team presentations |
Chesapeake Bay Oyster Fisheries |
file_link |
TEM Pleurochrysis carterae thin section images |
Transmission electron micrographs of P. carterae CCMP 645 cell thin sections |
Marine Chronic Viruses |
thumbnail |
TEM Pleurochrysis carterae virion images |
Transmission electron micrographs of virions from P. carterae CCMP 645 culture supernatant |
Marine Chronic Viruses |
thumbnail |
Temporal genetic patterns in plankton |
Temporal genetic patterns in P. xiphias and H. longicornis - Mitochondrial data, station ALOHA |
Plankton_PopStructure, Plankton Population Genetics |
file_link |
Wave Glider - Holographic Images |
Holographic Images from LISST-Holo system |
MAGI |
Raw_thumbnail |
West Bay 2011-2012 Acoustic Time Series: raw files |
Raw files from DSG hydrophone |
Larval settlement soundscapes |
file_link |